| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720066
Identifier: 53720066
GI number: 53720066
Start: 2965914
End: 2967356
Strand: Reverse
Name: 53720066
Synonym: BPSL2460
Alternate gene names: NA
Gene position: 2967356-2965914 (Counterclockwise)
Preceding gene: 53720067
Following gene: 53720065
Centisome position: 72.83
GC content: 66.6
Gene sequence:
>1443_bases ATGAAACGACATGCCGCCTGGGCGGGCATGGCGCTGGGAGGCGCATTAGGCGCCGCGCCCGCGCTCGCATCGGCCGCAAC GCTCGACGGTGCCGCGCTTTCCGCGTTCTGGGCGGTTCCGTTCGCCGGCATCCTGTTGTCGATCGCGGTCTTTCCGCTGA TCGCGCCGGTGTTCTGGCATCACCATTTCGGCAAGATCGCGGCGGCGTGGGCGGTTGCGTTCCTGGTGCCGTTCGCCGCG ACGTTCGGCTTCGGCACCGCGTTCGGCACGCTGATGCACGCGCTGTTCGAGGAATACATCCCGTTCATCGTGCTGCTGAG CGCGCTGTATACGGTCGCGGGCGGTATCTGCGTGCGCGGCAACCTGCACGGCACGCCCAGGCTCAATACGGGCATCCTCG CGCTCGGCACCGTGCTCGCGAGCGTGATGGGCACCACGGGCGCCGCGATGCTGCTGATCCGTCCGCTCCTGCGCGCGAAC GACAATCGCAAGCACGTCGTGCACGTCGTCGTGTTCTTCATCTTTCTCGTGGCGAACGCGGGCGGCTCGCTGTCGCCGCT CGGCGATCCGCCGCTCTTCCTCGGCTTTCTGAACGGCGTCGATTTCTTCTGGACGACGATCCATCTCGCGCTGCCGATGC TGTTCATCTGCGCGATCCTGCTCACGCTCTTCTTCGTGCTCGATACCTACTTCTATCGAAAGGGCGGCGAGGAAGGCAAG CCGTTCCTCGATCCGACGCCCGATTCGCACGGCATGTCGATCGAGGGCAAGGTCAATTTCGTGCTGCTCGGTGCGGTGAT CGCGCTCGTGCTGATGAGCGGCCTCTGGAAGCCGGGCATCGCGTTCGATCTGTTCGGCACGCACGTCGCGCTGCAGAATG CGGTGCGCGACGTCGCGCTCGTCGCGGTCGCGCTCGTGTCGCTCGCGGTCACGCCGCGCTCGGCGCGCGAGGGCAACGCG TTCAACTGGGCGCCGATCGAGGAGGTCGCGAAGCTGTTCGCGGGCATCTTCGTGACGATCGCGCCCGTGATCGTGATTCT GCGCGCGGGCGGCGACGGCGTGTTCGCGCCGATCGTCCATCTCGTCACGGGCGCCGACGGCAAGCCGGTCGACGCGATGT ACTTCTGGGCGACGGGCGTGCTCTCGTCGTTCCTCGACAACGCGCCGACCTATCTCGTGTTCTTCAATCTCGCGGGCGGC GATGCGCAGACGCTGATGACGACGGGGGCGACGACGCTCGCGGCGATCTCGGCGGGCGCCGTGTTCATGGGCGCGAACAG CTACATCGGCAACGCGCCGAATTTCATGGTGAAGGCGATCGCCGAGTCGCGCGGCGTGCGGATGCCGAGCTTCTTCGCGT ACCTCGGCTGGGCGCTCGCGATTCTCGTGCCGGTGTTCCTGCTGACGACGTGGGTGTTCTTCAGCGCTCAGGCGGCGCAA TGA
Upstream 100 bases:
>100_bases CACGGGCCGTCGCGGGTTCACGCGATCGTCGTGCGTGACGCGTGATGCGGCCGCCGCCGCGTCACGCGCCGTATCCATTC GCATTTCAAGAGGAATTCAC
Downstream 100 bases:
>100_bases CGGCCGCACGGGCGATGCGCGGCGCGATGCGCGCGCGCCGCCCGCGCGGCGCAACGGAGACGGCAATGCAGAAAATCCTG GTCGCGCGCCCGATCTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Arsenite-Anitmonite Efflux Pump ArsB Family; Na+ Antiporter; Na+/H+ Antiporter; Transporter Uit6 Family; Signal Peptide; ArsB Family Arsenate Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases; Na+/H+ Antiporter NhaD; Arsenite Transport Protein ArsB; NA+/H+ Antiporter Permease; Na+/H+ Antiporter NhaD-Like Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases-Like; Na+/H+ Antiporter NhaD Or Related Arsenite Permease
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MKRHAAWAGMALGGALGAAPALASAATLDGAALSAFWAVPFAGILLSIAVFPLIAPVFWHHHFGKIAAAWAVAFLVPFAA TFGFGTAFGTLMHALFEEYIPFIVLLSALYTVAGGICVRGNLHGTPRLNTGILALGTVLASVMGTTGAAMLLIRPLLRAN DNRKHVVHVVVFFIFLVANAGGSLSPLGDPPLFLGFLNGVDFFWTTIHLALPMLFICAILLTLFFVLDTYFYRKGGEEGK PFLDPTPDSHGMSIEGKVNFVLLGAVIALVLMSGLWKPGIAFDLFGTHVALQNAVRDVALVAVALVSLAVTPRSAREGNA FNWAPIEEVAKLFAGIFVTIAPVIVILRAGGDGVFAPIVHLVTGADGKPVDAMYFWATGVLSSFLDNAPTYLVFFNLAGG DAQTLMTTGATTLAAISAGAVFMGANSYIGNAPNFMVKAIAESRGVRMPSFFAYLGWALAILVPVFLLTTWVFFSAQAAQ
Sequences:
>Translated_480_residues MKRHAAWAGMALGGALGAAPALASAATLDGAALSAFWAVPFAGILLSIAVFPLIAPVFWHHHFGKIAAAWAVAFLVPFAA TFGFGTAFGTLMHALFEEYIPFIVLLSALYTVAGGICVRGNLHGTPRLNTGILALGTVLASVMGTTGAAMLLIRPLLRAN DNRKHVVHVVVFFIFLVANAGGSLSPLGDPPLFLGFLNGVDFFWTTIHLALPMLFICAILLTLFFVLDTYFYRKGGEEGK PFLDPTPDSHGMSIEGKVNFVLLGAVIALVLMSGLWKPGIAFDLFGTHVALQNAVRDVALVAVALVSLAVTPRSAREGNA FNWAPIEEVAKLFAGIFVTIAPVIVILRAGGDGVFAPIVHLVTGADGKPVDAMYFWATGVLSSFLDNAPTYLVFFNLAGG DAQTLMTTGATTLAAISAGAVFMGANSYIGNAPNFMVKAIAESRGVRMPSFFAYLGWALAILVPVFLLTTWVFFSAQAAQ >Mature_480_residues MKRHAAWAGMALGGALGAAPALASAATLDGAALSAFWAVPFAGILLSIAVFPLIAPVFWHHHFGKIAAAWAVAFLVPFAA TFGFGTAFGTLMHALFEEYIPFIVLLSALYTVAGGICVRGNLHGTPRLNTGILALGTVLASVMGTTGAAMLLIRPLLRAN DNRKHVVHVVVFFIFLVANAGGSLSPLGDPPLFLGFLNGVDFFWTTIHLALPMLFICAILLTLFFVLDTYFYRKGGEEGK PFLDPTPDSHGMSIEGKVNFVLLGAVIALVLMSGLWKPGIAFDLFGTHVALQNAVRDVALVAVALVSLAVTPRSAREGNA FNWAPIEEVAKLFAGIFVTIAPVIVILRAGGDGVFAPIVHLVTGADGKPVDAMYFWATGVLSSFLDNAPTYLVFFNLAGG DAQTLMTTGATTLAAISAGAVFMGANSYIGNAPNFMVKAIAESRGVRMPSFFAYLGWALAILVPVFLLTTWVFFSAQAAQ
Specific function: Unknown
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50594; Mature: 50594
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRHAAWAGMALGGALGAAPALASAATLDGAALSAFWAVPFAGILLSIAVFPLIAPVFWH CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHFGKIAAAWAVAFLVPFAATFGFGTAFGTLMHALFEEYIPFIVLLSALYTVAGGICVRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC NLHGTPRLNTGILALGTVLASVMGTTGAAMLLIRPLLRANDNRKHVVHVVVFFIFLVANA CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC GGSLSPLGDPPLFLGFLNGVDFFWTTIHLALPMLFICAILLTLFFVLDTYFYRKGGEEGK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PFLDPTPDSHGMSIEGKVNFVLLGAVIALVLMSGLWKPGIAFDLFGTHVALQNAVRDVAL CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH VAVALVSLAVTPRSAREGNAFNWAPIEEVAKLFAGIFVTIAPVIVILRAGGDGVFAPIVH HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LVTGADGKPVDAMYFWATGVLSSFLDNAPTYLVFFNLAGGDAQTLMTTGATTLAAISAGA HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCHHHHHHHHCCC VFMGANSYIGNAPNFMVKAIAESRGVRMPSFFAYLGWALAILVPVFLLTTWVFFSAQAAQ CEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRHAAWAGMALGGALGAAPALASAATLDGAALSAFWAVPFAGILLSIAVFPLIAPVFWH CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHFGKIAAAWAVAFLVPFAATFGFGTAFGTLMHALFEEYIPFIVLLSALYTVAGGICVRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC NLHGTPRLNTGILALGTVLASVMGTTGAAMLLIRPLLRANDNRKHVVHVVVFFIFLVANA CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC GGSLSPLGDPPLFLGFLNGVDFFWTTIHLALPMLFICAILLTLFFVLDTYFYRKGGEEGK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PFLDPTPDSHGMSIEGKVNFVLLGAVIALVLMSGLWKPGIAFDLFGTHVALQNAVRDVAL CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH VAVALVSLAVTPRSAREGNAFNWAPIEEVAKLFAGIFVTIAPVIVILRAGGDGVFAPIVH HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LVTGADGKPVDAMYFWATGVLSSFLDNAPTYLVFFNLAGGDAQTLMTTGATTLAAISAGA HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCHHHHHHHHCCC VFMGANSYIGNAPNFMVKAIAESRGVRMPSFFAYLGWALAILVPVFLLTTWVFFSAQAAQ CEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA