| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is otsB [H]
Identifier: 53720017
GI number: 53720017
Start: 2915053
End: 2915862
Strand: Reverse
Name: otsB [H]
Synonym: BPSL2411
Alternate gene names: 53720017
Gene position: 2915862-2915053 (Counterclockwise)
Preceding gene: 53720021
Following gene: 53720016
Centisome position: 71.56
GC content: 71.85
Gene sequence:
>810_bases ATGCGCACATTCGCCCGGCGGGCGCGCCCGCCGGCAGCCATTCTCTTCAGCGAATCGATGCAATCCATCCCGCTTTCCCT GCCCCTTTCCCGCACCGCGTTCTTCTTCGATTTCGACGGCACGCTCGTCGACCTCGCGCCGACGCCCGACGCCATCCAGG TGCCGCCCGACGTGCCCGTGCTCGTCGACGCGCTGCGGCAGCTGTCGCACGGCGCGGTCGCGATCGTGTCCGGGCGCGGC ATCGACAGCATCGACGCATACCTCAACCTGCCCGGCCTGCCGGTGGCGGGCCTGCACGGCGCCGAGCGGCGCGACGCGAA CGGCGACACGCAGCGGATCGGCTTCGACGATCCGCGGCTGCTGCGTATCGAGCGCGAACTCGCGGCGCTCGTCGATCGCC ACCCGGGCATGCTGCTCGAGATCAAGGGCGCGGCGCTCGCGCTGCATTTTCGCAACGCGCCCGAACGCGAGGGCGTCGCG CGCGCGGCGGCCGAGCGGCTCGTCGCCGATTACGCGGATGCGTACGTGCTGCAGCCGGGCAAGATGGTGTTCGAGATCAA GCCGAAGGGCGTCGACAAGGGGCGCGCGGTTGCCGCGTTCCTGAACGAGCCGCCGTTCGCCGGCCGCATGCCGGTGTTCG CCGGCGACGATCTGACCGACGAGCAGGGCTTCGCCGTCGCCAACGCGAACGGCGGATTGTCGATCAAGGTCGGTGCGGGC GACACGACGGCGCGCGCGCGCGTCGATTCGGTCGCCGCGTTGCGCGCGCAGCTCGCGCGCTGGATCGCCGCGGGGCGCGC GCCCGCATGA
Upstream 100 bases:
>100_bases ACCGCGCACCGAACCGGGGCAAAATGTCGCAGCGATGCGGCCAGCCGCCCGCGCGCCGCGGGGCCCGCGCTTTTGTTCAT CGTGCACGAGGCGCGGTAAG
Downstream 100 bases:
>100_bases GCCGTCTCATCATCGTCTCGAATCGGGTCGCGCCGATCTCCGAAGGAGAACCCGCGGCCGGCGGCCTCGCGATCGGCGTC TACGACGCGCTGAAGGAAAC
Product: putative trehalose-phosphatase
Products: NA
Alternate protein names: TPP; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRTFARRARPPAAILFSESMQSIPLSLPLSRTAFFFDFDGTLVDLAPTPDAIQVPPDVPVLVDALRQLSHGAVAIVSGRG IDSIDAYLNLPGLPVAGLHGAERRDANGDTQRIGFDDPRLLRIERELAALVDRHPGMLLEIKGAALALHFRNAPEREGVA RAAAERLVADYADAYVLQPGKMVFEIKPKGVDKGRAVAAFLNEPPFAGRMPVFAGDDLTDEQGFAVANANGGLSIKVGAG DTTARARVDSVAALRAQLARWIAAGRAPA
Sequences:
>Translated_269_residues MRTFARRARPPAAILFSESMQSIPLSLPLSRTAFFFDFDGTLVDLAPTPDAIQVPPDVPVLVDALRQLSHGAVAIVSGRG IDSIDAYLNLPGLPVAGLHGAERRDANGDTQRIGFDDPRLLRIERELAALVDRHPGMLLEIKGAALALHFRNAPEREGVA RAAAERLVADYADAYVLQPGKMVFEIKPKGVDKGRAVAAFLNEPPFAGRMPVFAGDDLTDEQGFAVANANGGLSIKVGAG DTTARARVDSVAALRAQLARWIAAGRAPA >Mature_269_residues MRTFARRARPPAAILFSESMQSIPLSLPLSRTAFFFDFDGTLVDLAPTPDAIQVPPDVPVLVDALRQLSHGAVAIVSGRG IDSIDAYLNLPGLPVAGLHGAERRDANGDTQRIGFDDPRLLRIERELAALVDRHPGMLLEIKGAALALHFRNAPEREGVA RAAAERLVADYADAYVLQPGKMVFEIKPKGVDKGRAVAAFLNEPPFAGRMPVFAGDDLTDEQGFAVANANGGLSIKVGAG DTTARARVDSVAALRAQLARWIAAGRAPA
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=222, Percent_Identity=45.4954954954955, Blast_Score=194, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6320279, Length=226, Percent_Identity=27.8761061946903, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI19920676, Length=247, Percent_Identity=28.7449392712551, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI221473368, Length=249, Percent_Identity=25.7028112449799, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI20129307, Length=249, Percent_Identity=25.7028112449799, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24582490, Length=249, Percent_Identity=25.7028112449799, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 28617; Mature: 28617
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFARRARPPAAILFSESMQSIPLSLPLSRTAFFFDFDGTLVDLAPTPDAIQVPPDVPV CCCHHHHCCCCEEEEECCHHHHCCCCCCCCCEEEEEECCCEEEEECCCCCCEECCCCCHH LVDALRQLSHGAVAIVSGRGIDSIDAYLNLPGLPVAGLHGAERRDANGDTQRIGFDDPRL HHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCE LRIERELAALVDRHPGMLLEIKGAALALHFRNAPEREGVARAAAERLVADYADAYVLQPG EEHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEECCC KMVFEIKPKGVDKGRAVAAFLNEPPFAGRMPVFAGDDLTDEQGFAVANANGGLSIKVGAG CEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEECCCCEEEEECCC DTTARARVDSVAALRAQLARWIAAGRAPA CCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRTFARRARPPAAILFSESMQSIPLSLPLSRTAFFFDFDGTLVDLAPTPDAIQVPPDVPV CCCHHHHCCCCEEEEECCHHHHCCCCCCCCCEEEEEECCCEEEEECCCCCCEECCCCCHH LVDALRQLSHGAVAIVSGRGIDSIDAYLNLPGLPVAGLHGAERRDANGDTQRIGFDDPRL HHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCE LRIERELAALVDRHPGMLLEIKGAALALHFRNAPEREGVARAAAERLVADYADAYVLQPG EEHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEECCC KMVFEIKPKGVDKGRAVAAFLNEPPFAGRMPVFAGDDLTDEQGFAVANANGGLSIKVGAG CEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEECCCCEEEEECCC DTTARARVDSVAALRAQLARWIAAGRAPA CCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]