| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720005
Identifier: 53720005
GI number: 53720005
Start: 2896410
End: 2897591
Strand: Reverse
Name: 53720005
Synonym: BPSL2399
Alternate gene names: NA
Gene position: 2897591-2896410 (Counterclockwise)
Preceding gene: 53720007
Following gene: 53720004
Centisome position: 71.11
GC content: 72.0
Gene sequence:
>1182_bases ATGACGGAATCGCTTTCCATCGTCGGTTGGGTGCTGCTCGCGCTCGTTTGCGCATCGTGCGGCTATGCGGTGCTCGCCGC GTGCGCGCCCGCGCCGCGCGTGCCCCGCGCGGCGCGGGCGCGCGACGGCTTCGAGCCCGTCAGCGTGCTCAAGCCGCTGT GCGGATCGGAGCCGCATCTCTACGAAAACCTCGCGACCTTCTGCGAGCAGCGGCATCCGCGCTATCAACTGCTGTTCGGC GTCGCGTCCGCGGCCGATCCGGCCATCGCCGTCGTGCGCCGGCTGCAGGCCGACTATCCCGATTGCGACATCGAGCTCGT GATCGACGCGCGCGTGTACGGCTCGAACCTGAAGGTCAGCAATCTCGTCAATCTCGCCGAGCGCGCGCGCCACGGCCGCA TCGTGATCGCCGACAGCGACATCGCGGTCGAGCCCGATTATCTGACGCGCGTGACGGCGCCGCTCGCCGATCCGTCGGTC GGTGTCGTCACTTGCCTGTATCATGCGCGCAGCGTCGGCGGCTTCTGGACGCGGATCGGCGCGCAATTCGTCGATGCATG GTTCGCGCCGTCGGTCCGGATCACGCATCTCGGCGGCTCGAGCCGCTTCGGCTTCGGCGCGACGCTCGCGCTCACGCGCG CGACGCTCGACGCGATCGGCGGCTTCAAGGCGCTGAAGGACGAGCTCGCGGACGACTACTGGCTCGCCGAGCTGCCGCGC CGCCTCGGGCTGCGCACGGTGCTCTCCGAGGTGAATGTGGCGACCGACGTCGCGGAGCCGTCGTTCGCGCCGCTGTGGCT GCGCGAGACGCGCTGGTTGCGCACGATCCGCTCGCTGAATCCGGCGGGGTTCGCCTTCCTGTTCATCACGTTTACCGCGC CGTGGCTCGTGATCGGCGCGGCGCTCGCGGCGTGGCTTGGCCCCGCGTCGGCCGCGGGCGCGACGGCCGCGTGGGCGGCC GCGATCGGCACGCTCGCGCGGCTCGCGCTGCACGCGCGCGGCGCGGCCGGATGGCGTGCGTTCTGGCGCGACTTGCCGCT CGTGCCGGTGCGCGACGCGCTGCTCGCGCTCGAATGGCTTGCCGCCGCGTTCGGCACGCAGGTCGTGTGGCGGGGCGCGC GGATGACGGTGGTCGGCGGCGATGCGCGCGCGACGGTCGTCGAAGCGGGCGACGGACGCTGA
Upstream 100 bases:
>100_bases AAGCAAGTCAGAAAGGAGTTGGGATCGTGTTCGAAATCGTCCCCGCCGAAGCATCGCGTCCCCGTCCCGTTTGCCGCCCG ATCGTCGGGAGGCGCGCGGC
Downstream 100 bases:
>100_bases CGAGCGCGGGGCTCATACACAGGATGCGCGGGCGGCGGCAGGCCGCCCGCGGTTTTCGAAACACTTGTACTGAACGAATT GATATCTATGCAGCAGGCTA
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Putatiave Glycosyltransferase; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTESLSIVGWVLLALVCASCGYAVLAACAPAPRVPRAARARDGFEPVSVLKPLCGSEPHLYENLATFCEQRHPRYQLLFG VASAADPAIAVVRRLQADYPDCDIELVIDARVYGSNLKVSNLVNLAERARHGRIVIADSDIAVEPDYLTRVTAPLADPSV GVVTCLYHARSVGGFWTRIGAQFVDAWFAPSVRITHLGGSSRFGFGATLALTRATLDAIGGFKALKDELADDYWLAELPR RLGLRTVLSEVNVATDVAEPSFAPLWLRETRWLRTIRSLNPAGFAFLFITFTAPWLVIGAALAAWLGPASAAGATAAWAA AIGTLARLALHARGAAGWRAFWRDLPLVPVRDALLALEWLAAAFGTQVVWRGARMTVVGGDARATVVEAGDGR
Sequences:
>Translated_393_residues MTESLSIVGWVLLALVCASCGYAVLAACAPAPRVPRAARARDGFEPVSVLKPLCGSEPHLYENLATFCEQRHPRYQLLFG VASAADPAIAVVRRLQADYPDCDIELVIDARVYGSNLKVSNLVNLAERARHGRIVIADSDIAVEPDYLTRVTAPLADPSV GVVTCLYHARSVGGFWTRIGAQFVDAWFAPSVRITHLGGSSRFGFGATLALTRATLDAIGGFKALKDELADDYWLAELPR RLGLRTVLSEVNVATDVAEPSFAPLWLRETRWLRTIRSLNPAGFAFLFITFTAPWLVIGAALAAWLGPASAAGATAAWAA AIGTLARLALHARGAAGWRAFWRDLPLVPVRDALLALEWLAAAFGTQVVWRGARMTVVGGDARATVVEAGDGR >Mature_392_residues TESLSIVGWVLLALVCASCGYAVLAACAPAPRVPRAARARDGFEPVSVLKPLCGSEPHLYENLATFCEQRHPRYQLLFGV ASAADPAIAVVRRLQADYPDCDIELVIDARVYGSNLKVSNLVNLAERARHGRIVIADSDIAVEPDYLTRVTAPLADPSVG VVTCLYHARSVGGFWTRIGAQFVDAWFAPSVRITHLGGSSRFGFGATLALTRATLDAIGGFKALKDELADDYWLAELPRR LGLRTVLSEVNVATDVAEPSFAPLWLRETRWLRTIRSLNPAGFAFLFITFTAPWLVIGAALAAWLGPASAAGATAAWAAA IGTLARLALHARGAAGWRAFWRDLPLVPVRDALLALEWLAAAFGTQVVWRGARMTVVGGDARATVVEAGDGR
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=284, Percent_Identity=28.5211267605634, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI25147526, Length=312, Percent_Identity=24.6794871794872, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI32566973, Length=232, Percent_Identity=27.5862068965517, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI25149577, Length=280, Percent_Identity=26.7857142857143, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI32564728, Length=280, Percent_Identity=26.7857142857143, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI25149574, Length=280, Percent_Identity=26.7857142857143, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI25149580, Length=281, Percent_Identity=26.6903914590747, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24657569, Length=293, Percent_Identity=26.6211604095563, Blast_Score=96, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42168; Mature: 42037
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESLSIVGWVLLALVCASCGYAVLAACAPAPRVPRAARARDGFEPVSVLKPLCGSEPHL CCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCHH YENLATFCEQRHPRYQLLFGVASAADPAIAVVRRLQADYPDCDIELVIDARVYGSNLKVS HHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCHH NLVNLAERARHGRIVIADSDIAVEPDYLTRVTAPLADPSVGVVTCLYHARSVGGFWTRIG HHHHHHHHHCCCEEEEECCCCEECCHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHH AQFVDAWFAPSVRITHLGGSSRFGFGATLALTRATLDAIGGFKALKDELADDYWLAELPR HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH RLGLRTVLSEVNVATDVAEPSFAPLWLRETRWLRTIRSLNPAGFAFLFITFTAPWLVIGA HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHH ALAAWLGPASAAGATAAWAAAIGTLARLALHARGAAGWRAFWRDLPLVPVRDALLALEWL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHH AAAFGTQVVWRGARMTVVGGDARATVVEAGDGR HHHHHHHHHCCCCEEEEECCCCEEEEEECCCCC >Mature Secondary Structure TESLSIVGWVLLALVCASCGYAVLAACAPAPRVPRAARARDGFEPVSVLKPLCGSEPHL CCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCHH YENLATFCEQRHPRYQLLFGVASAADPAIAVVRRLQADYPDCDIELVIDARVYGSNLKVS HHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCHH NLVNLAERARHGRIVIADSDIAVEPDYLTRVTAPLADPSVGVVTCLYHARSVGGFWTRIG HHHHHHHHHCCCEEEEECCCCEECCHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHH AQFVDAWFAPSVRITHLGGSSRFGFGATLALTRATLDAIGGFKALKDELADDYWLAELPR HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH RLGLRTVLSEVNVATDVAEPSFAPLWLRETRWLRTIRSLNPAGFAFLFITFTAPWLVIGA HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHH ALAAWLGPASAAGATAAWAAAIGTLARLALHARGAAGWRAFWRDLPLVPVRDALLALEWL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHH AAAFGTQVVWRGARMTVVGGDARATVVEAGDGR HHHHHHHHHCCCCEEEEECCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA