| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719827
Identifier: 53719827
GI number: 53719827
Start: 2662817
End: 2663635
Strand: Reverse
Name: 53719827
Synonym: BPSL2218
Alternate gene names: NA
Gene position: 2663635-2662817 (Counterclockwise)
Preceding gene: 53719828
Following gene: 53719826
Centisome position: 65.37
GC content: 66.79
Gene sequence:
>819_bases ATGCTTTCCATCATCGTGACATGGCGAAACCGCAACGAACTGGCCGGCGCGCTGCCGGGGCTCGTGGAGACCGCGGGCCG GCTGAACGGCGAAGTCGTGATCGTGAATTTCGGCGGCGACGCGGCGAGCCTCGCCCGCCAGCTCGAGGGCTTCGAGCATG CGGTTCAGGTCGCGCAGTGGCGCGAGCAGCGCTATTTCCACAAGACGAAGGCGCAGAACCTCGGCGCGCACGCGGCCCGT CACGACATGCTGTTCTTTTGCGACTGCGACATCATCGTCGAGCCGGACGCGATCGTGTCGCTCGTGCGCAAGCTCGACGC GGCGCCCGGCGCGTTCGCGACACTGAAAGGCGTGCGCGAGACGGAGCAGAACGCGCGGCAGGCGAAGAACGTCGTTCGCT TCGGCTATCGGCTGGACGTGAGGATTCGCAACGGCCGCGAACTCACGATCGTCGACAACGAGGAGGACGCGCAGGACGGC ACGCGCCAGGCGCCGGGGCTGCTGTTCGTGAGAAGGCGGGATTTCCTCGCGGTGAACGGCTACAACGGGCGTCTGCACGG CTGGGGCTGGGAGGATCAGGACATGATCTCGCGGCTCACGCTGGGCGCGGGCCTCGTGCGGCACGTCGAGGGCCATGCGC TGCACATCTCGCACGACGATCACGCGCGCGTGTCGCAGTATCCGATGGAGAACCGCTGGGAGAGCCGCGACAAGATGTTC CGGCAGGCGCTCGCGTACTACGACGACGACGATTTTCTCGGGACGTACGCGCAGGATGTCGAACTTTTCGCGGCGCAGGC GGGCCTCGCGTGCTCGTGA
Upstream 100 bases:
>100_bases GCGATCCGGCACGCGTGACGCGCGGCCGGCACCCGGCGCGCCGCCGCGCGCGTCGGCGCGACACTTCGACGGCGTCGATT CAACCCGAAGGAGATTGACC
Downstream 100 bases:
>100_bases GCGGCGCGCGCCGCGCCGCCGTGAAGCCGCGCCGCGGCCGCGCGGCCGATTCGATTCGCCGCGGGCCCCATCGGCGGGCG GAACCGGCGGGCGGAACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLSIIVTWRNRNELAGALPGLVETAGRLNGEVVIVNFGGDAASLARQLEGFEHAVQVAQWREQRYFHKTKAQNLGAHAAR HDMLFFCDCDIIVEPDAIVSLVRKLDAAPGAFATLKGVRETEQNARQAKNVVRFGYRLDVRIRNGRELTIVDNEEDAQDG TRQAPGLLFVRRRDFLAVNGYNGRLHGWGWEDQDMISRLTLGAGLVRHVEGHALHISHDDHARVSQYPMENRWESRDKMF RQALAYYDDDDFLGTYAQDVELFAAQAGLACS
Sequences:
>Translated_272_residues MLSIIVTWRNRNELAGALPGLVETAGRLNGEVVIVNFGGDAASLARQLEGFEHAVQVAQWREQRYFHKTKAQNLGAHAAR HDMLFFCDCDIIVEPDAIVSLVRKLDAAPGAFATLKGVRETEQNARQAKNVVRFGYRLDVRIRNGRELTIVDNEEDAQDG TRQAPGLLFVRRRDFLAVNGYNGRLHGWGWEDQDMISRLTLGAGLVRHVEGHALHISHDDHARVSQYPMENRWESRDKMF RQALAYYDDDDFLGTYAQDVELFAAQAGLACS >Mature_272_residues MLSIIVTWRNRNELAGALPGLVETAGRLNGEVVIVNFGGDAASLARQLEGFEHAVQVAQWREQRYFHKTKAQNLGAHAAR HDMLFFCDCDIIVEPDAIVSLVRKLDAAPGAFATLKGVRETEQNARQAKNVVRFGYRLDVRIRNGRELTIVDNEEDAQDG TRQAPGLLFVRRRDFLAVNGYNGRLHGWGWEDQDMISRLTLGAGLVRHVEGHALHISHDDHARVSQYPMENRWESRDKMF RQALAYYDDDDFLGTYAQDVELFAAQAGLACS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30634; Mature: 30634
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIIVTWRNRNELAGALPGLVETAGRLNGEVVIVNFGGDAASLARQLEGFEHAVQVAQW CEEEEEEECCCCHHHHHCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH REQRYFHKTKAQNLGAHAARHDMLFFCDCDIIVEPDAIVSLVRKLDAAPGAFATLKGVRE HHHHHHHHHHHHHCCCHHHHCCEEEEEECCEEECCHHHHHHHHHHCCCCCHHHHHHHHHH TEQNARQAKNVVRFGYRLDVRIRNGRELTIVDNEEDAQDGTRQAPGLLFVRRRDFLAVNG HHHHHHHHHHHHHHCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEC YNGRLHGWGWEDQDMISRLTLGAGLVRHVEGHALHISHDDHARVSQYPMENRWESRDKMF CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCHHHCCHHHHHH RQALAYYDDDDFLGTYAQDVELFAAQAGLACS HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLSIIVTWRNRNELAGALPGLVETAGRLNGEVVIVNFGGDAASLARQLEGFEHAVQVAQW CEEEEEEECCCCHHHHHCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH REQRYFHKTKAQNLGAHAARHDMLFFCDCDIIVEPDAIVSLVRKLDAAPGAFATLKGVRE HHHHHHHHHHHHHCCCHHHHCCEEEEEECCEEECCHHHHHHHHHHCCCCCHHHHHHHHHH TEQNARQAKNVVRFGYRLDVRIRNGRELTIVDNEEDAQDGTRQAPGLLFVRRRDFLAVNG HHHHHHHHHHHHHHCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEC YNGRLHGWGWEDQDMISRLTLGAGLVRHVEGHALHISHDDHARVSQYPMENRWESRDKMF CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCHHHCCHHHHHH RQALAYYDDDDFLGTYAQDVELFAAQAGLACS HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA