| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719798
Identifier: 53719798
GI number: 53719798
Start: 2628233
End: 2628667
Strand: Reverse
Name: 53719798
Synonym: BPSL2189
Alternate gene names: NA
Gene position: 2628667-2628233 (Counterclockwise)
Preceding gene: 53719799
Following gene: 53719794
Centisome position: 64.51
GC content: 67.13
Gene sequence:
>435_bases ATGTTCAAGCACATCCTGGTTCCGACCGACGGGTCCGAGCTGTCGAAGAAGGCCATCGACGGCGCGATCGATCTCGCGCA GGCGGTGGGCGCGCGCGTGACGGCCTACGCGTGCCTGCCGCAATATCCGTACTCGCCGTTTTCCGAAGTCGTGATCGAGC CGCCCGCTGATTTTCGCGAGCGCAGCGAGCGCGAGGCGCGCATGCATCTGGACGAAGTGGAGGCGGCCGCGCGCCGCGCG GGCGTCGCGTGCGAATCGGCGACGAGCGTGCATCCGTCGCCCTATCTCGGCATCATCGAGGCCGCGGAGCGGGGCGGCTG CGACGTGATCTTCATGGCGTCGCACGGCAGACGCGGGCTCGGCAGCCTGCTCATCGGCAGCGAGACGCAACGCGTGCTGA CCCATACGAAGATTCCCGTGATCGTCTATCGATAG
Upstream 100 bases:
>100_bases CAATCGAATCACTCGGCGTCCGCGCGGGCCGCCCGGCCCCGACGGCTGGCCGCGGGTGCGCCCGCGGCCGGACGCGCCGC AGTTGCCGACGGAGGTCGCC
Downstream 100 bases:
>100_bases CGCGCCGGCCGTCGCTCATTGCCCGCCGTTTATCGCCGGGCGTTCGGTTGCGACGCGTCGCGCAAAAAAAACGGCGCGCC GGGCAAGGGACCGGCGCGCT
Product: universal stress protein family protein
Products: NA
Alternate protein names: UspA Domain Protein; UspA Domain-Containing Protein; Universal Stress Family Protein; Universal Stress Protein UspA; Universal Stress Family; Universal Stress Protein F; Universal Stress Protein UspA Family; Uspa Domain Protein
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MFKHILVPTDGSELSKKAIDGAIDLAQAVGARVTAYACLPQYPYSPFSEVVIEPPADFRERSEREARMHLDEVEAAARRA GVACESATSVHPSPYLGIIEAAERGGCDVIFMASHGRRGLGSLLIGSETQRVLTHTKIPVIVYR
Sequences:
>Translated_144_residues MFKHILVPTDGSELSKKAIDGAIDLAQAVGARVTAYACLPQYPYSPFSEVVIEPPADFRERSEREARMHLDEVEAAARRA GVACESATSVHPSPYLGIIEAAERGGCDVIFMASHGRRGLGSLLIGSETQRVLTHTKIPVIVYR >Mature_144_residues MFKHILVPTDGSELSKKAIDGAIDLAQAVGARVTAYACLPQYPYSPFSEVVIEPPADFRERSEREARMHLDEVEAAARRA GVACESATSVHPSPYLGIIEAAERGGCDVIFMASHGRRGLGSLLIGSETQRVLTHTKIPVIVYR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15621; Mature: 15621
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKHILVPTDGSELSKKAIDGAIDLAQAVGARVTAYACLPQYPYSPFSEVVIEPPADFRE CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCHHEEECCCCCHHH RSEREARMHLDEVEAAARRAGVACESATSVHPSPYLGIIEAAERGGCDVIFMASHGRRGL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEECCCCCCCCEEEEECCCCCCC GSLLIGSETQRVLTHTKIPVIVYR CCEEECCCHHHHHHHCCCCEEEEC >Mature Secondary Structure MFKHILVPTDGSELSKKAIDGAIDLAQAVGARVTAYACLPQYPYSPFSEVVIEPPADFRE CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCHHEEECCCCCHHH RSEREARMHLDEVEAAARRAGVACESATSVHPSPYLGIIEAAERGGCDVIFMASHGRRGL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEECCCCCCCCEEEEECCCCCCC GSLLIGSETQRVLTHTKIPVIVYR CCEEECCCHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA