| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yeaZ [H]
Identifier: 53719794
GI number: 53719794
Start: 2623078
End: 2623839
Strand: Reverse
Name: yeaZ [H]
Synonym: BPSL2185
Alternate gene names: 53719794
Gene position: 2623839-2623078 (Counterclockwise)
Preceding gene: 53719798
Following gene: 53719793
Centisome position: 64.4
GC content: 76.51
Gene sequence:
>762_bases ATGACGCAAACAGTGCTCCTCGCCATCGATACGTCGACCGAGTTCTGCTCGGTCGCGCTGCTCGCCGCGGACGGCCCGAC GGCCGACGCCGCTTCCTTCCGAACCTGGGTCCGCCACGAGCGCACGGGCGCCGTGTCGAGCACGCGCGTGCTGCCCGCCG TGCGCGAGGTGCTCGACGAAGCGGGCCTCGCGTTCGCCGATTGCAATGCGATCGCGTTCGGCGCGGGGCCCGGCTCGTTT ACCGGGCTGCGCACCGCCACCGGCGTTGCGCAAGGGCTCGCGTTCGGCCGCGCGCTGCCTGTCGTGCCGGTCGGCACGCT CCTCGCGTGCGCCGAAGCCGCGCGCCTGAACGCGGGCGCCGCCGCCGGCCGCGCGACGCGCGTGCTCGCCGCGCTCGATG CGCGCATGGACGAGGTCTATTGGGCCGACTACGCGTGGGACGACGCGGCGGGCGACTGGCAGGCGCTCGTGCCCGCGTCG CTCGCGGCGCCCGCCGACGTGCGGGCGCCCGATGCGCCGTTCGTGCTCGCCGGCAACGCGGCGGCCGCGTTCGGCGAGCG TCTGCCCGCCTGCGCGCGCGCGCAGGCGATCGACGCGAACGCGCTGCCGCATGCGCTGCCGATCGCGCACGTCGCGCTGC GCGCATATCGCGCGGGACGCGCCGTGCCGGCCGATCGCGCGGCGCCCGAGTACGTGCGCGACAAGGTCGCGCAGACCACC GCCGAGCGGCTCGCCGCGCGCGCGGACGGAGGCGGCCGATGA
Upstream 100 bases:
>100_bases CGGGTCGAGCGTTCCTTCCAAACCGATTCGCGCCCGGCGCACGCGCGCGAATCGGAGCCGATCGCCCGTGCGGGCGGGGC GCCGCATTACAATGTCGGCC
Downstream 100 bases:
>100_bases GCGGCGTGCTGATGACCGATCGCTATCTGGCACCGATGACGGACGCCGATCTCGACGAAGTCGTCGAGATCGAGCGCGCC GCGTACGAATTTCCGTGGTC
Product: family M22 non-peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTQTVLLAIDTSTEFCSVALLAADGPTADAASFRTWVRHERTGAVSSTRVLPAVREVLDEAGLAFADCNAIAFGAGPGSF TGLRTATGVAQGLAFGRALPVVPVGTLLACAEAARLNAGAAAGRATRVLAALDARMDEVYWADYAWDDAAGDWQALVPAS LAAPADVRAPDAPFVLAGNAAAAFGERLPACARAQAIDANALPHALPIAHVALRAYRAGRAVPADRAAPEYVRDKVAQTT AERLAARADGGGR
Sequences:
>Translated_253_residues MTQTVLLAIDTSTEFCSVALLAADGPTADAASFRTWVRHERTGAVSSTRVLPAVREVLDEAGLAFADCNAIAFGAGPGSF TGLRTATGVAQGLAFGRALPVVPVGTLLACAEAARLNAGAAAGRATRVLAALDARMDEVYWADYAWDDAAGDWQALVPAS LAAPADVRAPDAPFVLAGNAAAAFGERLPACARAQAIDANALPHALPIAHVALRAYRAGRAVPADRAAPEYVRDKVAQTT AERLAARADGGGR >Mature_252_residues TQTVLLAIDTSTEFCSVALLAADGPTADAASFRTWVRHERTGAVSSTRVLPAVREVLDEAGLAFADCNAIAFGAGPGSFT GLRTATGVAQGLAFGRALPVVPVGTLLACAEAARLNAGAAAGRATRVLAALDARMDEVYWADYAWDDAAGDWQALVPASL AAPADVRAPDAPFVLAGNAAAAFGERLPACARAQAIDANALPHALPIAHVALRAYRAGRAVPADRAAPEYVRDKVAQTTA ERLAARADGGGR
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=240, Percent_Identity=37.5, Blast_Score=129, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 25886; Mature: 25755
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTVLLAIDTSTEFCSVALLAADGPTADAASFRTWVRHERTGAVSSTRVLPAVREVLDE CCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AGLAFADCNAIAFGAGPGSFTGLRTATGVAQGLAFGRALPVVPVGTLLACAEAARLNAGA CCCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC AAGRATRVLAALDARMDEVYWADYAWDDAAGDWQALVPASLAAPADVRAPDAPFVLAGNA HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCEEEECCH AAAFGERLPACARAQAIDANALPHALPIAHVALRAYRAGRAVPADRAAPEYVRDKVAQTT HHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH AERLAARADGGGR HHHHHHHCCCCCC >Mature Secondary Structure TQTVLLAIDTSTEFCSVALLAADGPTADAASFRTWVRHERTGAVSSTRVLPAVREVLDE CCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AGLAFADCNAIAFGAGPGSFTGLRTATGVAQGLAFGRALPVVPVGTLLACAEAARLNAGA CCCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC AAGRATRVLAALDARMDEVYWADYAWDDAAGDWQALVPASLAAPADVRAPDAPFVLAGNA HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCEEEECCH AAAFGERLPACARAQAIDANALPHALPIAHVALRAYRAGRAVPADRAAPEYVRDKVAQTT HHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH AERLAARADGGGR HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]