| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719791
Identifier: 53719791
GI number: 53719791
Start: 2620271
End: 2621251
Strand: Reverse
Name: 53719791
Synonym: BPSL2182
Alternate gene names: NA
Gene position: 2621251-2620271 (Counterclockwise)
Preceding gene: 53719792
Following gene: 53719788
Centisome position: 64.33
GC content: 73.19
Gene sequence:
>981_bases ATGAGCGCCGCGGCGTCGCCCGTGCCGCCGGTCGCATTGCGCGACGCGGCCGTGCGCGACCTCGCGTGGCTGCTGTCGAG CGCGAGCCTGCTCGCGCCGTCGGCGGGCGCGCCGCTTGCGCAGCCGTGGGCGAGCGTGGCCGACGCGGCGCGCACGGCCG CATGGCTCGCCGCGCTCGACGCGCAGCCGGCGCCGCTCCATGACGCGCTCGCCCACGCGCGCCCGGTCCGCCTCGGCCGT TATGCCGAGTGTCTGCTCGGCTTTTTCGTCGGCCATGCGCCGTCGCTGCGGCTCGTCGCCGCGAATCTGCCGCTGAGATC GAACGGTCGCACGCTCGGCGAGTGCGATTTCCTGATCGAGACCGCACGCGGCGAGCGCCTGCACTGGGAGCTCGCGGTCA AATGCTATCTGTGCGTCGCGACGGCGGGCACCGCGTCGCTCGCCGATTTCGTCGGCCCGAATCTCGCCGACCGCTTCGAC CTCAAGCGTGCGAAGCTCGTCGATCATCAACTGCGGCTCACGGCACGCGACGAGTTCGCGTCGCTCGGCCACGCGGGGCC GTGGCGTGCTCAGATGTTCGTGAAGGGGTGGCTGTTCTATCGCGCGGACGACGGCGCGAACGCGGCCGGCGCGGTGGCCG ATCCACCCGAAATCGGCGCCGACCATCCGCGTGGTTTCTGGATCACGCGCGAAGCGTGGCCGAAGTTCGCGCTTGCCGCC GCGCGGCGCGACGTCGCATGGATCGTGCTGCCGCGCCTCGCATGGCTCGCGCCGCGCGCGTTCGACGATGCGGACGTGGC TTGCGGGCGTTGCGTGCCGCTCGCGTCGGACGCGGTGATTGACGAAGTCGCGCGGCAGTCGGGGCCGTTGCTCGTCGCCG CGCTCGCGCGCGACGCCAGCGGGGGGTGGCGCGAAACCGCGCGCGGCTTCATCGCGCCCGACGATTGGCCACGGCGGGCA AGCGCGTTCGCCGCGCGTTGA
Upstream 100 bases:
>100_bases CGTATCTGCTGCGCAGCCTGCAGGACAAGGCGAAGGCCTGGTCCGATCTGTGTTTGGCGAACGATACCTACCGGAGTGCC GCGCCCGCCGCCGATCCGCC
Downstream 100 bases:
>100_bases CCGGCATCGGCGGGCATTCGATGCACGACGGTTCATGTCGATGCGAGGTGTGTTTCGGCGGAGGCTTCGATCGGGCGCAC GCCGTCCGCCGAGACGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSAAASPVPPVALRDAAVRDLAWLLSSASLLAPSAGAPLAQPWASVADAARTAAWLAALDAQPAPLHDALAHARPVRLGR YAECLLGFFVGHAPSLRLVAANLPLRSNGRTLGECDFLIETARGERLHWELAVKCYLCVATAGTASLADFVGPNLADRFD LKRAKLVDHQLRLTARDEFASLGHAGPWRAQMFVKGWLFYRADDGANAAGAVADPPEIGADHPRGFWITREAWPKFALAA ARRDVAWIVLPRLAWLAPRAFDDADVACGRCVPLASDAVIDEVARQSGPLLVAALARDASGGWRETARGFIAPDDWPRRA SAFAAR
Sequences:
>Translated_326_residues MSAAASPVPPVALRDAAVRDLAWLLSSASLLAPSAGAPLAQPWASVADAARTAAWLAALDAQPAPLHDALAHARPVRLGR YAECLLGFFVGHAPSLRLVAANLPLRSNGRTLGECDFLIETARGERLHWELAVKCYLCVATAGTASLADFVGPNLADRFD LKRAKLVDHQLRLTARDEFASLGHAGPWRAQMFVKGWLFYRADDGANAAGAVADPPEIGADHPRGFWITREAWPKFALAA ARRDVAWIVLPRLAWLAPRAFDDADVACGRCVPLASDAVIDEVARQSGPLLVAALARDASGGWRETARGFIAPDDWPRRA SAFAAR >Mature_325_residues SAAASPVPPVALRDAAVRDLAWLLSSASLLAPSAGAPLAQPWASVADAARTAAWLAALDAQPAPLHDALAHARPVRLGRY AECLLGFFVGHAPSLRLVAANLPLRSNGRTLGECDFLIETARGERLHWELAVKCYLCVATAGTASLADFVGPNLADRFDL KRAKLVDHQLRLTARDEFASLGHAGPWRAQMFVKGWLFYRADDGANAAGAVADPPEIGADHPRGFWITREAWPKFALAAA RRDVAWIVLPRLAWLAPRAFDDADVACGRCVPLASDAVIDEVARQSGPLLVAALARDASGGWRETARGFIAPDDWPRRAS AFAAR
Specific function: Unknown
COG id: COG3782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34869; Mature: 34738
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAASPVPPVALRDAAVRDLAWLLSSASLLAPSAGAPLAQPWASVADAARTAAWLAALD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC AQPAPLHDALAHARPVRLGRYAECLLGFFVGHAPSLRLVAANLPLRSNGRTLGECDFLIE CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHEEE TARGERLHWELAVKCYLCVATAGTASLADFVGPNLADRFDLKRAKLVDHQLRLTARDEFA CCCCCEEEHHHEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEHHHHH SLGHAGPWRAQMFVKGWLFYRADDGANAAGAVADPPEIGADHPRGFWITREAWPKFALAA HCCCCCCHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCHHHHHHH ARRDVAWIVLPRLAWLAPRAFDDADVACGRCVPLASDAVIDEVARQSGPLLVAALARDAS HHCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCC GGWRETARGFIAPDDWPRRASAFAAR CCHHHHHCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure SAAASPVPPVALRDAAVRDLAWLLSSASLLAPSAGAPLAQPWASVADAARTAAWLAALD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC AQPAPLHDALAHARPVRLGRYAECLLGFFVGHAPSLRLVAANLPLRSNGRTLGECDFLIE CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHEEE TARGERLHWELAVKCYLCVATAGTASLADFVGPNLADRFDLKRAKLVDHQLRLTARDEFA CCCCCEEEHHHEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEHHHHH SLGHAGPWRAQMFVKGWLFYRADDGANAAGAVADPPEIGADHPRGFWITREAWPKFALAA HCCCCCCHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCHHHHHHH ARRDVAWIVLPRLAWLAPRAFDDADVACGRCVPLASDAVIDEVARQSGPLLVAALARDAS HHCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCC GGWRETARGFIAPDDWPRRASAFAAR CCHHHHHCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA