| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is pucL [H]
Identifier: 53719728
GI number: 53719728
Start: 2543922
End: 2544446
Strand: Reverse
Name: pucL [H]
Synonym: BPSL2117
Alternate gene names: 53719728
Gene position: 2544446-2543922 (Counterclockwise)
Preceding gene: 53719729
Following gene: 53719727
Centisome position: 62.45
GC content: 68.38
Gene sequence:
>525_bases ATGATGAAGGCGATGCACTATACGCTCGAGCAGTTGAACGCGATGTCGACGGATGCGTTCGTCGCGGCGCTGTCCGGGAT CTTCGAGCATTCGCCGTGGGTCGCCGAAGCCGCCGCCGCCGCGCGGCCGTTCGGCAGCATCGACGCGTTGCACGGGACGA TGAAGGACGCGGTCGAAGCCGCGGGCGACGCGCGGCAGCTCGCGCTCATCAATGCGCACCCCGAACTCGCCGGCAAGGCG GCGGTGCGCGGCGAGCTGACCGCCGAGTCGACCCGCGAGCAGAGCGGCGCGGGGCTCGACCGCTGCACGCAGGCGGAATT CGACAGGCTGCAGCAGCTCAACCGCGCGTACCGCGAGAAATTCGGCTTCCCGTTCATTCTCGCGGTGCGCGGCTTCGATC GGCACGGCATCATCGCGAACTTCGAGGCGCGCGTCGGCCATACGCGCGACGAGGAGTTGCGCGCGAGCCTCGCGCAGATC TATCGGATCGCGCGTTTCAGGCTCGACGATCTGATCGGCGCGTGA
Upstream 100 bases:
>100_bases AGCGGCACGATCGCGTGTGGGTCGCGCGCCGCGTCGAGATCGCGCGGCACTGGCGCGAGCATCATCCGTATCGGCCGCAC GCCCGGCGCGAGGGGGACGC
Downstream 100 bases:
>100_bases GCGTCGGCTGAACGCTTCGGCGGCTCGGCGCGGAGCAGGGTTGCGCCGCGATCGATCCGTGCCGGCGAAGCGAAAACGAA TCCGGCGATGCGCGGCGCGG
Product: putative uricase
Products: NA
Alternate protein names: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; OHCU decarboxylase; Uricase; Urate oxidase [H]
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MMKAMHYTLEQLNAMSTDAFVAALSGIFEHSPWVAEAAAAARPFGSIDALHGTMKDAVEAAGDARQLALINAHPELAGKA AVRGELTAESTREQSGAGLDRCTQAEFDRLQQLNRAYREKFGFPFILAVRGFDRHGIIANFEARVGHTRDEELRASLAQI YRIARFRLDDLIGA
Sequences:
>Translated_174_residues MMKAMHYTLEQLNAMSTDAFVAALSGIFEHSPWVAEAAAAARPFGSIDALHGTMKDAVEAAGDARQLALINAHPELAGKA AVRGELTAESTREQSGAGLDRCTQAEFDRLQQLNRAYREKFGFPFILAVRGFDRHGIIANFEARVGHTRDEELRASLAQI YRIARFRLDDLIGA >Mature_174_residues MMKAMHYTLEQLNAMSTDAFVAALSGIFEHSPWVAEAAAAARPFGSIDALHGTMKDAVEAAGDARQLALINAHPELAGKA AVRGELTAESTREQSGAGLDRCTQAEFDRLQQLNRAYREKFGFPFILAVRGFDRHGIIANFEARVGHTRDEELRASLAQI YRIARFRLDDLIGA
Specific function: Catalyzes two steps in the degradation of uric acid, i.e. the oxidation of uric acid to 5-hydroxyisourate (HIU) and the stereoselective decarboxylation of 2-oxo-4-hydroxy-4-carboxy-5- ureidoimidazoline (OHCU) to (S)-allantoin [H]
COG id: COG3195
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the uricase family [H]
Homologues:
Organism=Homo sapiens, GI157743280, Length=166, Percent_Identity=37.9518072289157, Blast_Score=109, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018020 - InterPro: IPR017580 - InterPro: IPR002042 - InterPro: IPR019842 [H]
Pfam domain/function: PF09349 OHCU_decarbox; PF01014 Uricase [H]
EC number: =1.7.3.3 [H]
Molecular weight: Translated: 19088; Mature: 19088
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKAMHYTLEQLNAMSTDAFVAALSGIFEHSPWVAEAAAAARPFGSIDALHGTMKDAVEA CCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH AGDARQLALINAHPELAGKAAVRGELTAESTREQSGAGLDRCTQAEFDRLQQLNRAYREK CCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FGFPFILAVRGFDRHGIIANFEARVGHTRDEELRASLAQIYRIARFRLDDLIGA CCCCEEEEEECCCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMKAMHYTLEQLNAMSTDAFVAALSGIFEHSPWVAEAAAAARPFGSIDALHGTMKDAVEA CCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH AGDARQLALINAHPELAGKAAVRGELTAESTREQSGAGLDRCTQAEFDRLQQLNRAYREK CCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FGFPFILAVRGFDRHGIIANFEARVGHTRDEELRASLAQIYRIARFRLDDLIGA CCCCEEEEEECCCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]