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The map label for this gene is alc1

Identifier: 53719727

GI number: 53719727

Start: 2542680

End: 2543693

Strand: Reverse

Name: alc1

Synonym: BPSL2116

Alternate gene names: 53719727

Gene position: 2543693-2542680 (Counterclockwise)

Preceding gene: 53719728

Following gene: 53719726

Centisome position: 62.43

GC content: 67.06

Gene sequence:

>1014_bases
ATGGCTCTTCCGCTTTCGGATCCGAACGCTCCCGAATTCACGCGGCGTTACGTGAATCTCGCCGATCCGCGTCTCGGCGC
GCAGGCGCTCGAGGCGAGCGACGATTTCTTCGCGCCGAAGGAGCGCATGCTGAATCCGGAGCCCGCGGTGTTCATCCCGG
GCAAATACGACGATCACGGCAAATGGATGGACGGCTGGGAGACGCGCCGCAAGCGCACGACGGGTTATGACTGGTGCGTC
GTGAAGCTCGCGCGTCCGGGCGTGATCAAGGGTGTCGACATCGATACGAGCCATTTCACCGGCAATTTCCCGCCCGCCGC
GTCGATCGAGGCCGCGCACGTGCCCGACGGCGCGCCGAACGAGGCGACGAAGTGGGTGGAGATCGTGCCGGCGACGACGC
TGCAGGGCAACAGCCATCACTACGTCGAAGCACGCGACGCGAACGCATACACGCATCTGCGCGTGAACCTCTACCCGGAC
GGCGGCATCGCGCGGCTGCGCGTCTACGGCCAGCCGCAGCTCGATTGGGCGGGCGCGAGCCGATCGGCGCTGTTCGATCT
CGCGGCGATGGAGAACGGCGGCTACGTCGTCGCGGCGAACAACCAGCACTTCGGCCTCGCGTCGAACGTGCTGCTGCCGG
GCCGCGGCGTGAACATGGGCGACGGCTGGGAGACGCGCCGCCGTCGCGAGCCGGGCAACGACTGGGCGATCGTCGCGCTC
GCGCAGCCGGGCGTGATCCGCAAGGTCGAAATCGACACCGCGCATTTCAAGGGCAACTATCCGGACCGCTGTTCGATCCA
GGCCGCCTATGTGCAGGGCGGCACCGACAGCTCGCTCGTCACGCAGGCGATGTTCTGGCCGGTGCTGCTCGGCGAGCAGA
AGCTGCAGATGGACAAGCAGCACGCTTTCGAAGCCGAGCTCGCCGCGCTCGGGCCCGTCACGCACGTGCGGCTGAACATC
ATTCCGGACGGCGGCGTATCGCGTCTGCGCGTATGGGGCACGCTCGACAAATGA

Upstream 100 bases:

>100_bases
GCGCGCCAGACGCGCCGCCTCTGTCGCCCGAGCCGCGCGAGACGGCGCGCGGCGGCGTTCCACTCATCAGGCATCACGCA
CTTACGACAAGGACAAGACG

Downstream 100 bases:

>100_bases
AGACGCTCTCGATCGAACCGCTGACGCGCGCCGCCTTCGCGCCGTTCGGCGACGTCATCGAAACGCAAGGCGCGAAGCAG
ATTCCGATCAACCTCGGCAC

Product: allantoicase

Products: NA

Alternate protein names: Allantoate amidinohydrolase 1

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MALPLSDPNAPEFTRRYVNLADPRLGAQALEASDDFFAPKERMLNPEPAVFIPGKYDDHGKWMDGWETRRKRTTGYDWCV
VKLARPGVIKGVDIDTSHFTGNFPPAASIEAAHVPDGAPNEATKWVEIVPATTLQGNSHHYVEARDANAYTHLRVNLYPD
GGIARLRVYGQPQLDWAGASRSALFDLAAMENGGYVVAANNQHFGLASNVLLPGRGVNMGDGWETRRRREPGNDWAIVAL
AQPGVIRKVEIDTAHFKGNYPDRCSIQAAYVQGGTDSSLVTQAMFWPVLLGEQKLQMDKQHAFEAELAALGPVTHVRLNI
IPDGGVSRLRVWGTLDK

Sequences:

>Translated_337_residues
MALPLSDPNAPEFTRRYVNLADPRLGAQALEASDDFFAPKERMLNPEPAVFIPGKYDDHGKWMDGWETRRKRTTGYDWCV
VKLARPGVIKGVDIDTSHFTGNFPPAASIEAAHVPDGAPNEATKWVEIVPATTLQGNSHHYVEARDANAYTHLRVNLYPD
GGIARLRVYGQPQLDWAGASRSALFDLAAMENGGYVVAANNQHFGLASNVLLPGRGVNMGDGWETRRRREPGNDWAIVAL
AQPGVIRKVEIDTAHFKGNYPDRCSIQAAYVQGGTDSSLVTQAMFWPVLLGEQKLQMDKQHAFEAELAALGPVTHVRLNI
IPDGGVSRLRVWGTLDK
>Mature_336_residues
ALPLSDPNAPEFTRRYVNLADPRLGAQALEASDDFFAPKERMLNPEPAVFIPGKYDDHGKWMDGWETRRKRTTGYDWCVV
KLARPGVIKGVDIDTSHFTGNFPPAASIEAAHVPDGAPNEATKWVEIVPATTLQGNSHHYVEARDANAYTHLRVNLYPDG
GIARLRVYGQPQLDWAGASRSALFDLAAMENGGYVVAANNQHFGLASNVLLPGRGVNMGDGWETRRRREPGNDWAIVALA
QPGVIRKVEIDTAHFKGNYPDRCSIQAAYVQGGTDSSLVTQAMFWPVLLGEQKLQMDKQHAFEAELAALGPVTHVRLNII
PDGGVSRLRVWGTLDK

Specific function: Unknown

COG id: COG4266

COG function: function code F; Allantoicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the allantoicase family

Homologues:

Organism=Homo sapiens, GI144953901, Length=365, Percent_Identity=38.0821917808219, Blast_Score=253, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6322220, Length=331, Percent_Identity=38.6706948640483, Blast_Score=231, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ALLC1_BURMA (Q62JH0)

Other databases:

- EMBL:   CP000010
- RefSeq:   YP_103149.1
- ProteinModelPortal:   Q62JH0
- SMR:   Q62JH0
- GeneID:   3088647
- GenomeReviews:   CP000010_GR
- KEGG:   bma:BMA1505
- TIGR:   BMA1505
- HOGENOM:   HBG480577
- OMA:   ELKSDDW
- PhylomeDB:   Q62JH0
- ProtClustDB:   PRK13257
- BioCyc:   BMAL243160:BMA_1505-MONOMER
- BRENDA:   3.5.3.4
- HAMAP:   MF_00813
- InterPro:   IPR005164
- InterPro:   IPR015908
- InterPro:   IPR008979
- PANTHER:   PTHR12045
- PIRSF:   PIRSF016516
- TIGRFAMs:   TIGR02961

Pfam domain/function: PF03561 Allantoicase; SSF49785 Gal_bind_like

EC number: =3.5.3.4

Molecular weight: Translated: 37075; Mature: 36944

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPLSDPNAPEFTRRYVNLADPRLGAQALEASDDFFAPKERMLNPEPAVFIPGKYDDHG
CCCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCEEECCCCCCCC
KWMDGWETRRKRTTGYDWCVVKLARPGVIKGVDIDTSHFTGNFPPAASIEAAHVPDGAPN
CCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCC
EATKWVEIVPATTLQGNSHHYVEARDANAYTHLRVNLYPDGGIARLRVYGQPQLDWAGAS
CCCEEEEEEECEEECCCCEEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCCEECCCC
RSALFDLAAMENGGYVVAANNQHFGLASNVLLPGRGVNMGDGWETRRRREPGNDWAIVAL
CHHEEEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEEEEE
AQPGVIRKVEIDTAHFKGNYPDRCSIQAAYVQGGTDSSLVTQAMFWPVLLGEQKLQMDKQ
ECCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHH
HAFEAELAALGPVTHVRLNIIPDGGVSRLRVWGTLDK
HHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEECCC
>Mature Secondary Structure 
ALPLSDPNAPEFTRRYVNLADPRLGAQALEASDDFFAPKERMLNPEPAVFIPGKYDDHG
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCEEECCCCCCCC
KWMDGWETRRKRTTGYDWCVVKLARPGVIKGVDIDTSHFTGNFPPAASIEAAHVPDGAPN
CCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCC
EATKWVEIVPATTLQGNSHHYVEARDANAYTHLRVNLYPDGGIARLRVYGQPQLDWAGAS
CCCEEEEEEECEEECCCCEEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCCEECCCC
RSALFDLAAMENGGYVVAANNQHFGLASNVLLPGRGVNMGDGWETRRRREPGNDWAIVAL
CHHEEEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEEEEE
AQPGVIRKVEIDTAHFKGNYPDRCSIQAAYVQGGTDSSLVTQAMFWPVLLGEQKLQMDKQ
ECCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHH
HAFEAELAALGPVTHVRLNIIPDGGVSRLRVWGTLDK
HHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA