| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719704
Identifier: 53719704
GI number: 53719704
Start: 2513634
End: 2513972
Strand: Reverse
Name: 53719704
Synonym: BPSL2093
Alternate gene names: NA
Gene position: 2513972-2513634 (Counterclockwise)
Preceding gene: 53719709
Following gene: 53719703
Centisome position: 61.7
GC content: 71.09
Gene sequence:
>339_bases TTGCCGCGTGACGAAGGGAACAAAACGACGAAAGAGGCGAGGCCCGTGATGCGGCCGACGAAGATGGCGTTCGTGCTGGC GCTCGCATGCGCCGGCTTCCTTGCTTCGGACTTCGCCTGCGCGCAGCGCCCGGAACGCGGCGCACCGCCGTCGCACAAGG TGCCGCGCGGCAACGGCGCGGCGCGGCGTCCCGCGCCGCCCGGCGAGCCGCCCGCGCGCGCGGCCGCCGTTCCGCCCGAT CTCGAGCAGCGCCGCCGCGACGGCCACATGACGCCGGAAGAACGGCATCTGTTGCGCCAGCATATCGAAGACGCGGTGCG CGAACTTTACAAACGTTGA
Upstream 100 bases:
>100_bases ACTCGAAGACGACATTCGGTGGATACTCCATCCACTTAACATTTACATGGTTTGCACGCCCGATTCTCGCAGGGTTTGTT CGTGTGCCAAAGGTAGCCGG
Downstream 100 bases:
>100_bases ATCGTTAAATCCGGCGTATCTCCGGCGTATCTCCGCTCGCGGTTCGTCGTCCTTCATCCGTCGTTCTTCGCCGGAAAAAT TCCGTAGCAATTCGATCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPRDEGNKTTKEARPVMRPTKMAFVLALACAGFLASDFACAQRPERGAPPSHKVPRGNGAARRPAPPGEPPARAAAVPPD LEQRRRDGHMTPEERHLLRQHIEDAVRELYKR
Sequences:
>Translated_112_residues MPRDEGNKTTKEARPVMRPTKMAFVLALACAGFLASDFACAQRPERGAPPSHKVPRGNGAARRPAPPGEPPARAAAVPPD LEQRRRDGHMTPEERHLLRQHIEDAVRELYKR >Mature_111_residues PRDEGNKTTKEARPVMRPTKMAFVLALACAGFLASDFACAQRPERGAPPSHKVPRGNGAARRPAPPGEPPARAAAVPPDL EQRRRDGHMTPEERHLLRQHIEDAVRELYKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12436; Mature: 12305
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRDEGNKTTKEARPVMRPTKMAFVLALACAGFLASDFACAQRPERGAPPSHKVPRGNGA CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ARRPAPPGEPPARAAAVPPDLEQRRRDGHMTPEERHLLRQHIEDAVRELYKR CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PRDEGNKTTKEARPVMRPTKMAFVLALACAGFLASDFACAQRPERGAPPSHKVPRGNGA CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ARRPAPPGEPPARAAAVPPDLEQRRRDGHMTPEERHLLRQHIEDAVRELYKR CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA