| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719641
Identifier: 53719641
GI number: 53719641
Start: 2425438
End: 2425998
Strand: Reverse
Name: 53719641
Synonym: BPSL2030
Alternate gene names: NA
Gene position: 2425998-2425438 (Counterclockwise)
Preceding gene: 53719642
Following gene: 53719640
Centisome position: 59.54
GC content: 69.16
Gene sequence:
>561_bases ATGAAGGCTCACTGGAAAGTCTGGGCGGCTCTCGCTTGCGTGTCCGCCTGCGCGGGCGTGCAGGCGCAGACCAGCCCGCT CACGGGGACGGTCAACTCGCAGCTCGTGCTGACGACGGGCTGCGCGGTCGATACGGGCGGCGGCTCGGTGAACTCGGCGA ACTTCGGCACGCTCGACTTCGGCACGCAGCCGAGCGGCTTCACGGGCCGGCTCACGAGCGCGGCGAAGGGCGGCGGCTCG ACGTCGACGCAAGTGACCTGCTCGCCTGACGTCACGTCGATCCAGGTGACGATCGACGGCGGCCAGAACGCGTCGAAGGG TGCGACCGTCGGCACGGGCACGCGCGCGCTCGCGAACGGCGCGAGCTTCGTGCCGTACGAAGTCTACGCGGATGCGGGGC ATTCGCAACAGTACGTGTCGGGCACGGCGCAATCGGTCGCGGTGCCGACACCCGGCGCCGCATTCGAGCTGCCGTTGTAC GGCGTCGTCAACAAGACGAACGCGTCGGCGCTCGCTGCCGGCACCTATACCGACGTGCTGAACGTCACGCTCGGCTGGTA A
Upstream 100 bases:
>100_bases CCGTCCGGGACCTACGAGGATTTGCTCGGCATCACGCTCGACTGGTGATCCGGGCAGGTATGCAGCAGCAGTTCTTTTTC ACCACACAGAAGGAAACAAC
Downstream 100 bases:
>100_bases GCGAGCGCGCCGTCCCGTTTGGCCTCGCGGCTCGCGCGCTAGCGGGCGGCGAGGCGGTCCCAGGTTTCCGATCGTCATGT CGACCTTACAACGAGTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Type I Pilus Protein CsuA/B; Type 1 Pili Subunit CsuA/B Protein; Spore Coat U; Type I Pilus Protein CsuB; Spore Coat Protein U Domain-Contain Protein; Spore Coat U Domain Protein; CsuA Protein
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKAHWKVWAALACVSACAGVQAQTSPLTGTVNSQLVLTTGCAVDTGGGSVNSANFGTLDFGTQPSGFTGRLTSAAKGGGS TSTQVTCSPDVTSIQVTIDGGQNASKGATVGTGTRALANGASFVPYEVYADAGHSQQYVSGTAQSVAVPTPGAAFELPLY GVVNKTNASALAAGTYTDVLNVTLGW
Sequences:
>Translated_186_residues MKAHWKVWAALACVSACAGVQAQTSPLTGTVNSQLVLTTGCAVDTGGGSVNSANFGTLDFGTQPSGFTGRLTSAAKGGGS TSTQVTCSPDVTSIQVTIDGGQNASKGATVGTGTRALANGASFVPYEVYADAGHSQQYVSGTAQSVAVPTPGAAFELPLY GVVNKTNASALAAGTYTDVLNVTLGW >Mature_186_residues MKAHWKVWAALACVSACAGVQAQTSPLTGTVNSQLVLTTGCAVDTGGGSVNSANFGTLDFGTQPSGFTGRLTSAAKGGGS TSTQVTCSPDVTSIQVTIDGGQNASKGATVGTGTRALANGASFVPYEVYADAGHSQQYVSGTAQSVAVPTPGAAFELPLY GVVNKTNASALAAGTYTDVLNVTLGW
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18471; Mature: 18471
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAHWKVWAALACVSACAGVQAQTSPLTGTVNSQLVLTTGCAVDTGGGSVNSANFGTLDF CCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEECCEEECCCCCCCCCCCCEEEC GTQPSGFTGRLTSAAKGGGSTSTQVTCSPDVTSIQVTIDGGQNASKGATVGTGTRALANG CCCCCCCCEEECCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCEECCCCHHHHCC ASFVPYEVYADAGHSQQYVSGTAQSVAVPTPGAAFELPLYGVVNKTNASALAAGTYTDVL CCCCEEEEEECCCCCCHHHCCCCCEEEECCCCCEEECCEEEEEECCCCCEEECCCEEEEE NVTLGW EEEECC >Mature Secondary Structure MKAHWKVWAALACVSACAGVQAQTSPLTGTVNSQLVLTTGCAVDTGGGSVNSANFGTLDF CCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEECCEEECCCCCCCCCCCCEEEC GTQPSGFTGRLTSAAKGGGSTSTQVTCSPDVTSIQVTIDGGQNASKGATVGTGTRALANG CCCCCCCCEEECCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCEECCCCHHHHCC ASFVPYEVYADAGHSQQYVSGTAQSVAVPTPGAAFELPLYGVVNKTNASALAAGTYTDVL CCCCEEEEEECCCCCCHHHCCCCCEEEECCCCCEEECCEEEEEECCCCCEEECCCEEEEE NVTLGW EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA