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The map label for this gene is yisS [H]

Identifier: 53719600

GI number: 53719600

Start: 2370040

End: 2371077

Strand: Reverse

Name: yisS [H]

Synonym: BPSL1988

Alternate gene names: 53719600

Gene position: 2371077-2370040 (Counterclockwise)

Preceding gene: 53719601

Following gene: 53719599

Centisome position: 58.19

GC content: 72.83

Gene sequence:

>1038_bases
ATGACAGTCAGTCACAGCGCCGCTGCGGTGCGCATCGGCATCGCGGGGCTCGGCCGGCTCGGCCGGCGCCACGCGGAGAA
CCTCGCGCGGCGCGTCGCGGGCGCGCGGCTCGCGGCCGCGTGCAGCCCGCTTGCCGACGAGTGCGCGTGGGCGCGCGAGA
CGCTCGCCGTGCCGCGCGTCTACGAGGATTTCGACGCGCTCGCGGCCGATCCCGAGCTCGACGCGCTCTGGCTCGTCACG
CCGTCGGCGCTGCACGCGGACCAGATCGTCGCCGCGTTGCGCGCGGGCAAGCACGTGTTCTGCGAGAAACCGCTGTCGCT
CGATCTCGGCGAATGCGAGCGGGTGCTCGCCGAGGCGCGCGCGCGGCCGCATCTCGTCGCGACGATCGGTTTCATGCGCC
GCTTCGATCCGAGCTATCGCGACGCGTACGCGCGCGTCGCGGCGGGCGAGATCGGCCGGCCGTTCCTCGTGCGCTCGCAG
ACCTGCGACCGGAACGATCCCGAGGGCTTTTTCGTGCGCTTCGCGCCGAGCTCGGGCGGCATCTTCCTCGATTGCACCGT
GCACGACATCGACGTCGCACGATGGCTGCTCGGCGCGCCGCGCGCGACGCGCGTGTACGCGGCGGGCGCGGTCGCGCTGC
ACGAGGGGCTGCGCGCGTGCGGCGACGTCGACAACGGCGTCGCGATCTGCGAGTTCGAAGGCGGCCGGCTCGCGATGTTC
TATGCGTCGCGCACGATGGCGCACGGCAACGACACGCACTCCGAAGTGATCGGCACGGCGGGCGCGCTCGCGATCGGCCG
CAACCCGCGCGCGAACCGCGTCGAGATCTATGATGCGGCGGGCATCCGCAACACCTGCACGCCGACGTTCTTCGACCGCT
TCGAGGATGCGTTCCTGATCGAGGCGCAGGCGTTCGTCGCGGCGGTGCGCGGCGAGGGCGCCGCCGGCGGCGCGACGCTC
GCGGACGCGCTCGAGGCGACGAGGATCGGCCATGCGCTGCGCGAATCGTTGCAGACCGGGCGGGCGATCGAGCTGTAG

Upstream 100 bases:

>100_bases
CGGCGTGAAGGCGCTCGAGCTCGCCGAGGCGGCGACGCTGTCGTGGCGCGAGGCCCGCGCGGTGACACTCGGCGAGCGGG
CGGCCTGAAGGAGCGATGCG

Downstream 100 bases:

>100_bases
CCCGACGTGCGCGCGCCGCACGGCGGGCAGCGCGGGCGCGCTCGCACGCCGGCCCCGCCCGCGCCGGCGTTTGCGCGCGC
GCGGGGGGCGCGCGCGAGCG

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MTVSHSAAAVRIGIAGLGRLGRRHAENLARRVAGARLAAACSPLADECAWARETLAVPRVYEDFDALAADPELDALWLVT
PSALHADQIVAALRAGKHVFCEKPLSLDLGECERVLAEARARPHLVATIGFMRRFDPSYRDAYARVAAGEIGRPFLVRSQ
TCDRNDPEGFFVRFAPSSGGIFLDCTVHDIDVARWLLGAPRATRVYAAGAVALHEGLRACGDVDNGVAICEFEGGRLAMF
YASRTMAHGNDTHSEVIGTAGALAIGRNPRANRVEIYDAAGIRNTCTPTFFDRFEDAFLIEAQAFVAAVRGEGAAGGATL
ADALEATRIGHALRESLQTGRAIEL

Sequences:

>Translated_345_residues
MTVSHSAAAVRIGIAGLGRLGRRHAENLARRVAGARLAAACSPLADECAWARETLAVPRVYEDFDALAADPELDALWLVT
PSALHADQIVAALRAGKHVFCEKPLSLDLGECERVLAEARARPHLVATIGFMRRFDPSYRDAYARVAAGEIGRPFLVRSQ
TCDRNDPEGFFVRFAPSSGGIFLDCTVHDIDVARWLLGAPRATRVYAAGAVALHEGLRACGDVDNGVAICEFEGGRLAMF
YASRTMAHGNDTHSEVIGTAGALAIGRNPRANRVEIYDAAGIRNTCTPTFFDRFEDAFLIEAQAFVAAVRGEGAAGGATL
ADALEATRIGHALRESLQTGRAIEL
>Mature_344_residues
TVSHSAAAVRIGIAGLGRLGRRHAENLARRVAGARLAAACSPLADECAWARETLAVPRVYEDFDALAADPELDALWLVTP
SALHADQIVAALRAGKHVFCEKPLSLDLGECERVLAEARARPHLVATIGFMRRFDPSYRDAYARVAAGEIGRPFLVRSQT
CDRNDPEGFFVRFAPSSGGIFLDCTVHDIDVARWLLGAPRATRVYAAGAVALHEGLRACGDVDNGVAICEFEGGRLAMFY
ASRTMAHGNDTHSEVIGTAGALAIGRNPRANRVEIYDAAGIRNTCTPTFFDRFEDAFLIEAQAFVAAVRGEGAAGGATLA
DALEATRIGHALRESLQTGRAIEL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787307, Length=190, Percent_Identity=31.0526315789474, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787574, Length=210, Percent_Identity=24.2857142857143, Blast_Score=63, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581117, Length=289, Percent_Identity=23.8754325259516, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 36911; Mature: 36780

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSHSAAAVRIGIAGLGRLGRRHAENLARRVAGARLAAACSPLADECAWARETLAVPRV
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHH
YEDFDALAADPELDALWLVTPSALHADQIVAALRAGKHVFCEKPLSLDLGECERVLAEAR
HHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHC
ARPHLVATIGFMRRFDPSYRDAYARVAAGEIGRPFLVRSQTCDRNDPEGFFVRFAPSSGG
CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCC
IFLDCTVHDIDVARWLLGAPRATRVYAAGAVALHEGLRACGDVDNGVAICEFEGGRLAMF
EEEEEEECHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEE
YASRTMAHGNDTHSEVIGTAGALAIGRNPRANRVEIYDAAGIRNTCTPTFFDRFEDAFLI
EEEHHHCCCCCCHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCEEE
EAQAFVAAVRGEGAAGGATLADALEATRIGHALRESLQTGRAIEL
EHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TVSHSAAAVRIGIAGLGRLGRRHAENLARRVAGARLAAACSPLADECAWARETLAVPRV
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHH
YEDFDALAADPELDALWLVTPSALHADQIVAALRAGKHVFCEKPLSLDLGECERVLAEAR
HHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHC
ARPHLVATIGFMRRFDPSYRDAYARVAAGEIGRPFLVRSQTCDRNDPEGFFVRFAPSSGG
CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCC
IFLDCTVHDIDVARWLLGAPRATRVYAAGAVALHEGLRACGDVDNGVAICEFEGGRLAMF
EEEEEEECHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEE
YASRTMAHGNDTHSEVIGTAGALAIGRNPRANRVEIYDAAGIRNTCTPTFFDRFEDAFLI
EEEHHHCCCCCCHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCEEE
EAQAFVAAVRGEGAAGGATLADALEATRIGHALRESLQTGRAIEL
EHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]