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The map label for this gene is ycgE [C]

Identifier: 53719551

GI number: 53719551

Start: 2308761

End: 2309165

Strand: Reverse

Name: ycgE [C]

Synonym: BPSL1938

Alternate gene names: 53719551

Gene position: 2309165-2308761 (Counterclockwise)

Preceding gene: 53719552

Following gene: 53719546

Centisome position: 56.67

GC content: 66.91

Gene sequence:

>405_bases
ATGACGTCGACGGTTGAGAAAGTCGTGTTGCCCCCGATTCCCGCGAAGCGCTACTTCACGATCGGGGAAGTGAGCGAATT
GTGCGGCGTGAAGCCTCACGTGCTGCGCTATTGGGAGCAGGAGTTCACGCAGTTGCGCCCGGTGAAGCGGCGGGGGAACC
GCCGCTACTACCAGCATCACGAGGTGCTGCTGATCCGGCGGATTCGCGAGCTGCTGTACGAGCAGGGGTTCACGATCAAC
GGCGCCCGCAACCGGCTCGACGCGGTCGGCAGCGAGCGCGGCGCGCCGCCCGAGCCCGATGAGCTCGAGCAGCATGCGGC
CGAGCACGCCGCGCGCGAAACGGTCGATGTCGCGCAACTGCGCCGCGCGCTGCTCGATGTGATCGGCGCACTCAAGCGGG
ACTGA

Upstream 100 bases:

>100_bases
GCGCTCGTCGAAAACGGCGCCGAGCCGGATCTCGCGCGTTAAGCCGGCGTTTCGCCTCCTGCGCGCGGCGCCCGCGCCTC
TTACCGACGGTTAACTGACG

Downstream 100 bases:

>100_bases
GCCGCACTGCGCTCGCGCGCAAGGCGGGCGGCGGCGGAACATCGAAGACGAGCCCGTGCGAACTACCGTTCGCGCGGGCT
TTTTTTCGAGCGGTTCCCTC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; Regulatory Protein MerR; MerR Family Regulatory Protein; MerR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR MerR Family; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Protein; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTSTVEKVVLPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFTQLRPVKRRGNRRYYQHHEVLLIRRIRELLYEQGFTIN
GARNRLDAVGSERGAPPEPDELEQHAAEHAARETVDVAQLRRALLDVIGALKRD

Sequences:

>Translated_134_residues
MTSTVEKVVLPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFTQLRPVKRRGNRRYYQHHEVLLIRRIRELLYEQGFTIN
GARNRLDAVGSERGAPPEPDELEQHAAEHAARETVDVAQLRRALLDVIGALKRD
>Mature_133_residues
TSTVEKVVLPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFTQLRPVKRRGNRRYYQHHEVLLIRRIRELLYEQGFTING
ARNRLDAVGSERGAPPEPDELEQHAAEHAARETVDVAQLRRALLDVIGALKRD

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15508; Mature: 15377

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTVEKVVLPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFTQLRPVKRRGNRRYYQHH
CCCCCCHHHCCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EVLLIRRIRELLYEQGFTINGARNRLDAVGSERGAPPEPDELEQHAAEHAARETVDVAQL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRALLDVIGALKRD
HHHHHHHHHHHCCC
>Mature Secondary Structure 
TSTVEKVVLPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFTQLRPVKRRGNRRYYQHH
CCCCCHHHCCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EVLLIRRIRELLYEQGFTINGARNRLDAVGSERGAPPEPDELEQHAAEHAARETVDVAQL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRALLDVIGALKRD
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA