Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53719546

Identifier: 53719546

GI number: 53719546

Start: 2300849

End: 2302075

Strand: Reverse

Name: 53719546

Synonym: BPSL1933

Alternate gene names: NA

Gene position: 2302075-2300849 (Counterclockwise)

Preceding gene: 53719551

Following gene: 53719544

Centisome position: 56.5

GC content: 64.47

Gene sequence:

>1227_bases
TTGTGGAAGGATTCCCAGAACATGACTGATCTTCGTCTTACCAAGCGGTTCGCAGCACTGCTTGCAACCGGCGCGTTCGT
TGCCGGCTGCAGTTCGCCGTCGCCTACGAAAATCGACTACAAGAGCGACTCGAAATCGAAGGAGGTGTCGCTCGCGGTGC
CGCCCAACATGCTCGACGAGACGCCGGATCAACGTTCTCTGCCGCCGCAGGGCGGCGCGACGTCGCTTTCCAGCCTGCAG
CAGGTGCAGCAGGCCGCGCCGCCGACCGATTCGGTCGCGCCCGCCGTGCCGGGCATGCACATTCAGCGCGACGGCACCGA
GAGCTGGCTCGTGATCGACGACAAGGCGCCCGCGCAAATCTGGCCTCAGGTGCGCCGCTTCTGGCAGGAGCAGGGTTTCC
TGCTTGTCGTCGAGCAGCGCGACAAGGGCGTGATGGAAACCGACTGGAACGAAACGCATCCGCAGATCAACGACGGCCTG
ATTCGCGGCGTGATCTCGAAGGCGATGGGCAACTCGTACGTGACGGCGGAGCGCAACAAGTACCGCACGCGCCTCGACGC
CGCGCCGAACGGCGGCACCTACGTGTTCATCAGCCAGAAGGGAATGCGCGAGGCGCTGACGGGCGCGAACAACGATTCGA
GCAAGTGGGAGCCGAAACCGAACGATCCCGGCCTCGAGACCGAATACCTGAAGCGCCTGATGGCCGTGATCGCGCAGAAC
GACGCGCGCGTGAAGGCGGCAGGCGTGCCGATCACCGACGATGCGGCGCCGTCGCGCGCGAAGGCGTCGAGCAACAAGAG
CAAGGAAGCGGCAGCGGCGATCGCCGCGAAGAACGTCGCTAGCGCGTCGACATCGAGCACACCGAGCGGAGCGTCGGTGC
CGGACGTGCCGCCTGAAGTGACGCTCGCGGAACCGTACGATCGTTCGTGGCTGCATGTCGGCCTGGCGCTCGATCGCGCG
AATTTCACGGTCGACGATCGCGATCGCACGAAGGGGCTCTACTACGTCCGCTACGTCGATCCGAAGGATCTGAGCGTCGA
GGAGCAGGGCTTCTGGAGCCAGCTCTTCCACGGCAAGAAGGAGAAGAAGGCGAAGCAATACCTGGTCAACGTGAAGGCGG
TGACCGAAGGCGAGACGCGCATCGCGGTGGTCGACGACAAGGGCAATGTCGATGCGTCGGCGCCCGCGCGGCAGATCATG
TCGCTCCTCGTCAATCAGTTGCGCTGA

Upstream 100 bases:

>100_bases
CCCGGGCGGCGAACAAGCGGGCGAACGAGACCCGCGCGCTTTTTGCACGGTCTGCCGCCGGACCGGTAAAATAGAAAGTT
GACTCACGGAAAACGTGACC

Downstream 100 bases:

>100_bases
AGTCGCCGTGGGCGGCCACCGCCGTCGAGCTGCGAAGCCCGCCGTATGGCGGGCTTTTTTTATTTGCACCCGCCGCCCGT
GCGCGCTTGGGCGCCCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MWKDSQNMTDLRLTKRFAALLATGAFVAGCSSPSPTKIDYKSDSKSKEVSLAVPPNMLDETPDQRSLPPQGGATSLSSLQ
QVQQAAPPTDSVAPAVPGMHIQRDGTESWLVIDDKAPAQIWPQVRRFWQEQGFLLVVEQRDKGVMETDWNETHPQINDGL
IRGVISKAMGNSYVTAERNKYRTRLDAAPNGGTYVFISQKGMREALTGANNDSSKWEPKPNDPGLETEYLKRLMAVIAQN
DARVKAAGVPITDDAAPSRAKASSNKSKEAAAAIAAKNVASASTSSTPSGASVPDVPPEVTLAEPYDRSWLHVGLALDRA
NFTVDDRDRTKGLYYVRYVDPKDLSVEEQGFWSQLFHGKKEKKAKQYLVNVKAVTEGETRIAVVDDKGNVDASAPARQIM
SLLVNQLR

Sequences:

>Translated_408_residues
MWKDSQNMTDLRLTKRFAALLATGAFVAGCSSPSPTKIDYKSDSKSKEVSLAVPPNMLDETPDQRSLPPQGGATSLSSLQ
QVQQAAPPTDSVAPAVPGMHIQRDGTESWLVIDDKAPAQIWPQVRRFWQEQGFLLVVEQRDKGVMETDWNETHPQINDGL
IRGVISKAMGNSYVTAERNKYRTRLDAAPNGGTYVFISQKGMREALTGANNDSSKWEPKPNDPGLETEYLKRLMAVIAQN
DARVKAAGVPITDDAAPSRAKASSNKSKEAAAAIAAKNVASASTSSTPSGASVPDVPPEVTLAEPYDRSWLHVGLALDRA
NFTVDDRDRTKGLYYVRYVDPKDLSVEEQGFWSQLFHGKKEKKAKQYLVNVKAVTEGETRIAVVDDKGNVDASAPARQIM
SLLVNQLR
>Mature_408_residues
MWKDSQNMTDLRLTKRFAALLATGAFVAGCSSPSPTKIDYKSDSKSKEVSLAVPPNMLDETPDQRSLPPQGGATSLSSLQ
QVQQAAPPTDSVAPAVPGMHIQRDGTESWLVIDDKAPAQIWPQVRRFWQEQGFLLVVEQRDKGVMETDWNETHPQINDGL
IRGVISKAMGNSYVTAERNKYRTRLDAAPNGGTYVFISQKGMREALTGANNDSSKWEPKPNDPGLETEYLKRLMAVIAQN
DARVKAAGVPITDDAAPSRAKASSNKSKEAAAAIAAKNVASASTSSTPSGASVPDVPPEVTLAEPYDRSWLHVGLALDRA
NFTVDDRDRTKGLYYVRYVDPKDLSVEEQGFWSQLFHGKKEKKAKQYLVNVKAVTEGETRIAVVDDKGNVDASAPARQIM
SLLVNQLR

Specific function: Unknown

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44567; Mature: 44567

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKDSQNMTDLRLTKRFAALLATGAFVAGCSSPSPTKIDYKSDSKSKEVSLAVPPNMLDE
CCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCEEEEECCCHHHHC
TPDQRSLPPQGGATSLSSLQQVQQAAPPTDSVAPAVPGMHIQRDGTESWLVIDDKAPAQI
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCHHH
WPQVRRFWQEQGFLLVVEQRDKGVMETDWNETHPQINDGLIRGVISKAMGNSYVTAERNK
HHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHH
YRTRLDAAPNGGTYVFISQKGMREALTGANNDSSKWEPKPNDPGLETEYLKRLMAVIAQN
HHHEECCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
DARVKAAGVPITDDAAPSRAKASSNKSKEAAAAIAAKNVASASTSSTPSGASVPDVPPEV
CCEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
TLAEPYDRSWLHVGLALDRANFTVDDRDRTKGLYYVRYVDPKDLSVEEQGFWSQLFHGKK
EECCCCCCCEEEEEEEEECCCCEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCHH
EKKAKQYLVNVKAVTEGETRIAVVDDKGNVDASAPARQIMSLLVNQLR
HHHHHHHEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWKDSQNMTDLRLTKRFAALLATGAFVAGCSSPSPTKIDYKSDSKSKEVSLAVPPNMLDE
CCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCEEEEECCCHHHHC
TPDQRSLPPQGGATSLSSLQQVQQAAPPTDSVAPAVPGMHIQRDGTESWLVIDDKAPAQI
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCHHH
WPQVRRFWQEQGFLLVVEQRDKGVMETDWNETHPQINDGLIRGVISKAMGNSYVTAERNK
HHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHH
YRTRLDAAPNGGTYVFISQKGMREALTGANNDSSKWEPKPNDPGLETEYLKRLMAVIAQN
HHHEECCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
DARVKAAGVPITDDAAPSRAKASSNKSKEAAAAIAAKNVASASTSSTPSGASVPDVPPEV
CCEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
TLAEPYDRSWLHVGLALDRANFTVDDRDRTKGLYYVRYVDPKDLSVEEQGFWSQLFHGKK
EECCCCCCCEEEEEEEEECCCCEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCHH
EKKAKQYLVNVKAVTEGETRIAVVDDKGNVDASAPARQIMSLLVNQLR
HHHHHHHEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]