| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719511
Identifier: 53719511
GI number: 53719511
Start: 2259446
End: 2259913
Strand: Reverse
Name: 53719511
Synonym: BPSL1897
Alternate gene names: NA
Gene position: 2259913-2259446 (Counterclockwise)
Preceding gene: 53719512
Following gene: 53719510
Centisome position: 55.46
GC content: 67.31
Gene sequence:
>468_bases ATGACGCGCGCGCTTGGACGATTGCGCTCGCCGCGCCGCCAGCGCGGCGCGACCGCGATCGAATTCGCGATCCTGTTCCC GATGTTCTTCCTGATCCTCTACGGGATCATCACGTACGGCATGATCTTCGCCGCGCAGCAGAGCCTGACGCTCGCCGCGA CGGAGGGCGCGCGCGCCGCGCTCAACTATCAGGTCGCGCAAACGCAGTCGGCGGCGCTCGGGCTGCGCGCCGCGGCCGCC TGCACGGCCGCGAACAATCTGACGGGCTGGCTGTCGGGCGCGACCTGCACGACCTCGACGAACTACACGTGCTCGTACGA TTCGACGATGTACTGCATCCAGGTGACGCTCACGTATCCGTACGCGGCCAACCCGCTCGTGCCGGCGGTGGCGCTGTTCG ATGCGGTGCTGCCGACCACGCTCACGAGCCGCGCGACGGTGCAGATCAACCCGACCAACATCATATGA
Upstream 100 bases:
>100_bases CGTTCGCGCTCGGCGCGCGCCGCGCCGCGCCGTATGCGGCGTTTCTCGTCGCGCCCGCCGCCGCGTGGCTCGCCTATCTG ATCCATACCGGAGGCACGCG
Downstream 100 bases:
>100_bases AGTACCCGAGCGACTAGGCCGCAGCGGCGCGCCGCCGGTTTTCCCCAACGTCATTCTCGCTGTTGCACTGATAACAACCA TGGCCAATCATCTGACCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: TadE-Like Protein; Transmembrane Protein; Flp Pilus Assembly Protein TadG
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTRALGRLRSPRRQRGATAIEFAILFPMFFLILYGIITYGMIFAAQQSLTLAATEGARAALNYQVAQTQSAALGLRAAAA CTAANNLTGWLSGATCTTSTNYTCSYDSTMYCIQVTLTYPYAANPLVPAVALFDAVLPTTLTSRATVQINPTNII
Sequences:
>Translated_155_residues MTRALGRLRSPRRQRGATAIEFAILFPMFFLILYGIITYGMIFAAQQSLTLAATEGARAALNYQVAQTQSAALGLRAAAA CTAANNLTGWLSGATCTTSTNYTCSYDSTMYCIQVTLTYPYAANPLVPAVALFDAVLPTTLTSRATVQINPTNII >Mature_154_residues TRALGRLRSPRRQRGATAIEFAILFPMFFLILYGIITYGMIFAAQQSLTLAATEGARAALNYQVAQTQSAALGLRAAAAC TAANNLTGWLSGATCTTSTNYTCSYDSTMYCIQVTLTYPYAANPLVPAVALFDAVLPTTLTSRATVQINPTNII
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16573; Mature: 16442
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRALGRLRSPRRQRGATAIEFAILFPMFFLILYGIITYGMIFAAQQSLTLAATEGARAA CCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHH LNYQVAQTQSAALGLRAAAACTAANNLTGWLSGATCTTSTNYTCSYDSTMYCIQVTLTYP EEEHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEECCCCEEECCCCEEEEEEEEEECC YAANPLVPAVALFDAVLPTTLTSRATVQINPTNII CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCC >Mature Secondary Structure TRALGRLRSPRRQRGATAIEFAILFPMFFLILYGIITYGMIFAAQQSLTLAATEGARAA CCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHH LNYQVAQTQSAALGLRAAAACTAANNLTGWLSGATCTTSTNYTCSYDSTMYCIQVTLTYP EEEHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEECCCCEEECCCCEEEEEEEEEECC YAANPLVPAVALFDAVLPTTLTSRATVQINPTNII CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA