Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53719312

Identifier: 53719312

GI number: 53719312

Start: 1969571

End: 1970482

Strand: Reverse

Name: 53719312

Synonym: BPSL1691

Alternate gene names: NA

Gene position: 1970482-1969571 (Counterclockwise)

Preceding gene: 53719313

Following gene: 53719311

Centisome position: 48.36

GC content: 61.95

Gene sequence:

>912_bases
ATGAGTGATTCTGTCAGTATTGCGAAATATATGCACCGTGACTGCCTCCATTGCCCAGCACCGCTGGTCGGCACAAGCTT
CAAACCTTGTCACTTTGCGGACATCGTCGATAACGGCTTGCAGGACGGCTTCTTCGAGGTGCACGCGGAAAACTACATGG
GCAAGGGCGGTCCGCCGCATCGGGCGCTAAGCGCGCTGCGCGAAACCTATCCGGTTTCCGTGCACGGCGTGTGCCTGTCG
ATCGGTGGGCCATCGCCGCTCGATGCGCATCACCTCGCACGTTTTCGTGATGTCGTCGCGCGCTACGAACCCGTGCTCGT
CTCCGAGCATCTTGCGTGGTCATCGCACGGCGGCGCCTTCTACAATGATCTGCTGCCCTTGCCCTATACGAAAGCGACGC
TTGATCGGGTTTGCGCGCACGTCGACCAGATTCAGGAGGCGATCGCGCGTCCGCTGCTGCTCGAGAATCCCTCGACCTAT
GTCGGGTTCGCGTCGTCGACGATGAGCGAAACCGAATTTATTGCGGCGGTCGCCGGGCGTACCGGTTGCGGCCTGTTGCT
CGACATCAATAACGCGTTCGTGTCGGCGACCAATCATGGCTGCTCGGCCGCCGACTATCTCGCAGATTTTCCGCTCGAAC
AGGTCGGCGAAATCCATCTGGCCGGACACAGCGAACAACGCGACGACGAGGACGAACCGCTTCTCATCGACAGCCACGAT
CGCCCGATTGCCGGCCCCGTATGGGCGTTGTACGCGAGCGTGATTGCCCGCACAGGGCCGGTGCCGACACTCGTCGAATG
GGACAGCCAGCTTCCCGACTGGCTCGTGCTGCGTGCGCAGGCGCTCGAAGCCCGCCGGATCATGGACGCTGCCGTCGCAT
CGCCCGTGGAGGTAGCCGATCATGCGCTCTGA

Upstream 100 bases:

>100_bases
CGGTACGTGCACGAGCATCCAGGTGCCGGGTGGCGGTCACGGCTCGCTCACGCCGCTGAAGTCGTAAAGCGCATCGACAA
GAGGAAATCCGGAGGCGCTC

Downstream 100 bases:

>100_bases
TGCTGCCGCTTCCGATTACGCGTGCGCGTTCGCGCCTGGCCTCACGAATCCGTCGATCGGCGCGCCGGACGACGCGATCG
CTCATGGGCACAAGCGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSDSVSIAKYMHRDCLHCPAPLVGTSFKPCHFADIVDNGLQDGFFEVHAENYMGKGGPPHRALSALRETYPVSVHGVCLS
IGGPSPLDAHHLARFRDVVARYEPVLVSEHLAWSSHGGAFYNDLLPLPYTKATLDRVCAHVDQIQEAIARPLLLENPSTY
VGFASSTMSETEFIAAVAGRTGCGLLLDINNAFVSATNHGCSAADYLADFPLEQVGEIHLAGHSEQRDDEDEPLLIDSHD
RPIAGPVWALYASVIARTGPVPTLVEWDSQLPDWLVLRAQALEARRIMDAAVASPVEVADHAL

Sequences:

>Translated_303_residues
MSDSVSIAKYMHRDCLHCPAPLVGTSFKPCHFADIVDNGLQDGFFEVHAENYMGKGGPPHRALSALRETYPVSVHGVCLS
IGGPSPLDAHHLARFRDVVARYEPVLVSEHLAWSSHGGAFYNDLLPLPYTKATLDRVCAHVDQIQEAIARPLLLENPSTY
VGFASSTMSETEFIAAVAGRTGCGLLLDINNAFVSATNHGCSAADYLADFPLEQVGEIHLAGHSEQRDDEDEPLLIDSHD
RPIAGPVWALYASVIARTGPVPTLVEWDSQLPDWLVLRAQALEARRIMDAAVASPVEVADHAL
>Mature_302_residues
SDSVSIAKYMHRDCLHCPAPLVGTSFKPCHFADIVDNGLQDGFFEVHAENYMGKGGPPHRALSALRETYPVSVHGVCLSI
GGPSPLDAHHLARFRDVVARYEPVLVSEHLAWSSHGGAFYNDLLPLPYTKATLDRVCAHVDQIQEAIARPLLLENPSTYV
GFASSTMSETEFIAAVAGRTGCGLLLDINNAFVSATNHGCSAADYLADFPLEQVGEIHLAGHSEQRDDEDEPLLIDSHDR
PIAGPVWALYASVIARTGPVPTLVEWDSQLPDWLVLRAQALEARRIMDAAVASPVEVADHAL

Specific function: Unknown

COG id: COG3220

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0276 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007801
- InterPro:   IPR013022 [H]

Pfam domain/function: PF05114 DUF692 [H]

EC number: NA

Molecular weight: Translated: 32849; Mature: 32718

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSVSIAKYMHRDCLHCPAPLVGTSFKPCHFADIVDNGLQDGFFEVHAENYMGKGGPPH
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEHHHCCCCCCCHH
RALSALRETYPVSVHGVCLSIGGPSPLDAHHLARFRDVVARYEPVLVSEHLAWSSHGGAF
HHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCH
YNDLLPLPYTKATLDRVCAHVDQIQEAIARPLLLENPSTYVGFASSTMSETEFIAAVAGR
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEECHHHHHHHHHHHHHCCC
TGCGLLLDINNAFVSATNHGCSAADYLADFPLEQVGEIHLAGHSEQRDDEDEPLLIDSHD
CCCEEEEECCCEEEECCCCCCCHHHHHHHCCHHHHCCEEECCCCCCCCCCCCCEEECCCC
RPIAGPVWALYASVIARTGPVPTLVEWDSQLPDWLVLRAQALEARRIMDAAVASPVEVAD
CCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HAL
CCC
>Mature Secondary Structure 
SDSVSIAKYMHRDCLHCPAPLVGTSFKPCHFADIVDNGLQDGFFEVHAENYMGKGGPPH
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEHHHCCCCCCCHH
RALSALRETYPVSVHGVCLSIGGPSPLDAHHLARFRDVVARYEPVLVSEHLAWSSHGGAF
HHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCH
YNDLLPLPYTKATLDRVCAHVDQIQEAIARPLLLENPSTYVGFASSTMSETEFIAAVAGR
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEECHHHHHHHHHHHHHCCC
TGCGLLLDINNAFVSATNHGCSAADYLADFPLEQVGEIHLAGHSEQRDDEDEPLLIDSHD
CCCEEEEECCCEEEECCCCCCCHHHHHHHCCHHHHCCEEECCCCCCCCCCCCCEEECCCC
RPIAGPVWALYASVIARTGPVPTLVEWDSQLPDWLVLRAQALEARRIMDAAVASPVEVAD
CCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HAL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA