| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719311
Identifier: 53719311
GI number: 53719311
Start: 1968802
End: 1969581
Strand: Reverse
Name: 53719311
Synonym: BPSL1690
Alternate gene names: NA
Gene position: 1969581-1968802 (Counterclockwise)
Preceding gene: 53719312
Following gene: 53719310
Centisome position: 48.34
GC content: 66.67
Gene sequence:
>780_bases ATGCGCTCTGATGCTGCCGCTTCCGATTACGCGTGCGCGTTCGCGCCTGGCCTCACGAATCCGTCGATCGGCGCGCCGGA CGACGCGATCGCTCATGGGCACAAGCGCGTCGCCCGCCGCTACGACGTCTACCGCAACAACGTGACGGTCAGCCTGATCG AAGCGCTCGCGGCGATTTACCCGGCGGTACAGCGCATCGTCGGTGTCGAGTTCTTCCGCGCGATGGCGCGCTTCCATGTA CGCGAAACGCTGCCCGTCTCGCCGCTGCTGTTCGAATACGGGCGCGACTTTCCGGACTTCATCGCCGGTTACGAATACGC GCGCACGATGCCGTGGCTCGCGGATACCGCCCGTATCGAGCGCGCATGGCTCGACGCGTATCACGCGGCCGATCTGTCGA CGCTGACCGCCGATGCGTTCACGGCGATCCCGCCGGATGCACTGGCCGCGGTGCGTCTCGTCCCGCATCCGGCCACCCGT ATCGTGCGCTCGCCGTATCCTGCCGTTTCGATCTTTGCGATGAACCGGTCCGATGGCCCCGTCACGTCGCTGCACTCCGC CGAAGCCGAGGATGCGCTCGTCACGCGCCCGGCGCACGACGTGATCGTCTCCCGGCTGCCGCTCGGTGGCGCGGTGTTCC TGATCAGCCTGATCGACGGTGCCTCGCTAGGCGACGCAGTCGCGATCACCCTCGAAGACAATCCCGCCTTCGATCTCCCG GCCAGCTTGCGCGGCATGATCGAAGCCGGCGTGTTTACCGCCATCCATTCCGGAGCCTGA
Upstream 100 bases:
>100_bases GACAGCCAGCTTCCCGACTGGCTCGTGCTGCGTGCGCAGGCGCTCGAAGCCCGCCGGATCATGGACGCTGCCGTCGCATC GCCCGTGGAGGTAGCCGATC
Downstream 100 bases:
>100_bases CCGCCATGTCCGATCGACACACCGCCAATCGCGCGCCGCTGCGCGCGCTCACCTCGCTTGTCAGCCGCGTGCGGCATGGT ATCCAGTGGCTCGCCCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MRSDAAASDYACAFAPGLTNPSIGAPDDAIAHGHKRVARRYDVYRNNVTVSLIEALAAIYPAVQRIVGVEFFRAMARFHV RETLPVSPLLFEYGRDFPDFIAGYEYARTMPWLADTARIERAWLDAYHAADLSTLTADAFTAIPPDALAAVRLVPHPATR IVRSPYPAVSIFAMNRSDGPVTSLHSAEAEDALVTRPAHDVIVSRLPLGGAVFLISLIDGASLGDAVAITLEDNPAFDLP ASLRGMIEAGVFTAIHSGA
Sequences:
>Translated_259_residues MRSDAAASDYACAFAPGLTNPSIGAPDDAIAHGHKRVARRYDVYRNNVTVSLIEALAAIYPAVQRIVGVEFFRAMARFHV RETLPVSPLLFEYGRDFPDFIAGYEYARTMPWLADTARIERAWLDAYHAADLSTLTADAFTAIPPDALAAVRLVPHPATR IVRSPYPAVSIFAMNRSDGPVTSLHSAEAEDALVTRPAHDVIVSRLPLGGAVFLISLIDGASLGDAVAITLEDNPAFDLP ASLRGMIEAGVFTAIHSGA >Mature_259_residues MRSDAAASDYACAFAPGLTNPSIGAPDDAIAHGHKRVARRYDVYRNNVTVSLIEALAAIYPAVQRIVGVEFFRAMARFHV RETLPVSPLLFEYGRDFPDFIAGYEYARTMPWLADTARIERAWLDAYHAADLSTLTADAFTAIPPDALAAVRLVPHPATR IVRSPYPAVSIFAMNRSDGPVTSLHSAEAEDALVTRPAHDVIVSRLPLGGAVFLISLIDGASLGDAVAITLEDNPAFDLP ASLRGMIEAGVFTAIHSGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27814; Mature: 27814
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSDAAASDYACAFAPGLTNPSIGAPDDAIAHGHKRVARRYDVYRNNVTVSLIEALAAIY CCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH PAVQRIVGVEFFRAMARFHVRETLPVSPLLFEYGRDFPDFIAGYEYARTMPWLADTARIE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHH RAWLDAYHAADLSTLTADAFTAIPPDALAAVRLVPHPATRIVRSPYPAVSIFAMNRSDGP HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEECCCCC VTSLHSAEAEDALVTRPAHDVIVSRLPLGGAVFLISLIDGASLGDAVAITLEDNPAFDLP CCHHHCCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC ASLRGMIEAGVFTAIHSGA HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSDAAASDYACAFAPGLTNPSIGAPDDAIAHGHKRVARRYDVYRNNVTVSLIEALAAIY CCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH PAVQRIVGVEFFRAMARFHVRETLPVSPLLFEYGRDFPDFIAGYEYARTMPWLADTARIE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHH RAWLDAYHAADLSTLTADAFTAIPPDALAAVRLVPHPATRIVRSPYPAVSIFAMNRSDGP HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEECCCCC VTSLHSAEAEDALVTRPAHDVIVSRLPLGGAVFLISLIDGASLGDAVAITLEDNPAFDLP CCHHHCCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC ASLRGMIEAGVFTAIHSGA HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA