Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53719109

Identifier: 53719109

GI number: 53719109

Start: 1711354

End: 1711728

Strand: Reverse

Name: 53719109

Synonym: BPSL1475

Alternate gene names: NA

Gene position: 1711728-1711354 (Counterclockwise)

Preceding gene: 53719116

Following gene: 53719108

Centisome position: 42.01

GC content: 65.07

Gene sequence:

>375_bases
TTGAAATTACATCAGGACCCGAGCAACGCGCTCAATACCGTCACCGGCTATGGCCCCGATTATGTCGACATCAATCTGCA
GCGCCACGAGACGAGCGTGATCGTGCTGCCCGGCGCACCCGTCGTCGAATGGCCCGTCGCGTCGTTCGACGCGCTCACGC
CCGAGCTCTTCGCGATGCTGCTCGAACCGCAACCCGAGGTCGTGGTCTTCGGCAGCGGCGCGAGACTGCGCTTCCCGCAT
CCGCGCCTGACCGCGCAACTCACCGCGCAGCGCGTCGGCGTCGAGACGATGGATTTCCAGGCCGCCTGCCGCACGTACAA
CATCCTGATGGCCGAAGGCCGGAAGGTCGCGGCGGCGCTGCTGATCGAACGTTAA

Upstream 100 bases:

>100_bases
GGCCGCACGCATCGCGGCAGGCGGCCCGCCCCGTTCGGGGCCGGATCGCCGCGCCGCGCGGCCTTTGTTCCGGCCCTTTT
CGACACCGCGGAAGACCGAT

Downstream 100 bases:

>100_bases
GCGAGCGTTAAGCCGCCCCGCGCTAAAACTTCCGGCGGCGCCTGCGTTCGCGCCCGTGTCCGCCGCGGCGCCCCGCTTCG
CGCCGCGGCCCGGGCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKLHQDPSNALNTVTGYGPDYVDINLQRHETSVIVLPGAPVVEWPVASFDALTPELFAMLLEPQPEVVVFGSGARLRFPH
PRLTAQLTAQRVGVETMDFQAACRTYNILMAEGRKVAAALLIER

Sequences:

>Translated_124_residues
MKLHQDPSNALNTVTGYGPDYVDINLQRHETSVIVLPGAPVVEWPVASFDALTPELFAMLLEPQPEVVVFGSGARLRFPH
PRLTAQLTAQRVGVETMDFQAACRTYNILMAEGRKVAAALLIER
>Mature_124_residues
MKLHQDPSNALNTVTGYGPDYVDINLQRHETSVIVLPGAPVVEWPVASFDALTPELFAMLLEPQPEVVVFGSGARLRFPH
PRLTAQLTAQRVGVETMDFQAACRTYNILMAEGRKVAAALLIER

Specific function: Unknown

COG id: COG3737

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13657; Mature: 13657

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHQDPSNALNTVTGYGPDYVDINLQRHETSVIVLPGAPVVEWPVASFDALTPELFAML
CCCCCCCCCHHCCCCCCCCCEEEEEEEECCEEEEEECCCCEEECCCCCCCCCCHHHHHHH
LEPQPEVVVFGSGARLRFPHPRLTAQLTAQRVGVETMDFQAACRTYNILMAEGRKVAAAL
CCCCCCEEEEECCCEEECCCCCHHHHHHHHHCCCEECCHHHHHHEEEEEEECCCEEEEEE
LIER
EECC
>Mature Secondary Structure
MKLHQDPSNALNTVTGYGPDYVDINLQRHETSVIVLPGAPVVEWPVASFDALTPELFAML
CCCCCCCCCHHCCCCCCCCCEEEEEEEECCEEEEEECCCCEEECCCCCCCCCCHHHHHHH
LEPQPEVVVFGSGARLRFPHPRLTAQLTAQRVGVETMDFQAACRTYNILMAEGRKVAAAL
CCCCCCEEEEECCCEEECCCCCHHHHHHHHHCCCEECCHHHHHHEEEEEEECCCEEEEEE
LIER
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA