| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is arnT2 [H]
Identifier: 53719108
GI number: 53719108
Start: 1709479
End: 1711185
Strand: Reverse
Name: arnT2 [H]
Synonym: BPSL1474
Alternate gene names: 53719108
Gene position: 1711185-1709479 (Counterclockwise)
Preceding gene: 53719109
Following gene: 53719107
Centisome position: 42.0
GC content: 68.66
Gene sequence:
>1707_bases ATGAACGATACGCCGACGAGGCTACCGCTCGATCGCGCCGCGCCCGTGACGCTGAACCGCGCCGCGCTCCTCCTTCTCGT CGCGGCGCTCGCCGTGATCTGGTTCGCGCCGCTCGGCCTGCGCCATCTGATTCCGAGCGACGAAGGGCGCTACGCCGAAA TGGCCCGCGAGATGTTCGTCACGGGCGACTGGATCACGCCGCGCTACAACGGCTACAAGTATTTCGAGAAGCCGCCGCTG CAGACCTGGCTCAACGCGCTCACGTTCGCGTGGTTCGGCATCGGCGAATGGCAGGCGCGCCTGTACACGGCGCTCGCGAG CTTCGCGGGCGTGCTCTTCGCCGGCTACGCCGGCGCGCGCGTGTTCAACCCGCGCGCGGGCTTTTTCGCGGCGCTCGTGC TCGCGAGCTCGCCGTACTGGAACCTGATGGGCCACTTCAACGCGCTCGACATGGGGCTGTCGCTGTGGATGACGGTCACG CTCTGCGCGCTGCTGCTCGCGCAGCGCCCCGGCATCGGCAAGCGCGCCGAGCGCGGCTGGATGTGGCTCTGCTGGGCGTC GATGGCGCTCGCCGTGCTGTCGAAGGGCCTGATCGGCCTGATCCTGCCGGGCGCCGTGCTCGTCCTCTACACGCTCGCGT CCCGCGACTGGGCGCTGTGGAAACGCCTGCACCTCGTGAGCGGCCTCGTCATCTTCTTCGCGATCGCGACACCCTGGTTC GTGCTCGTGCAGTCGCGCAACCCCGAGTTCTTCAACTTCTTCTTCATCGTCCAGCAGTTCCGGCGCTACCTGACGCCCGA GCAGAACCGCCCCGGCGCGTTCTACTACTTCGCGCCGGTGCTCGCCGTCGGCTTCCTGCCGTGGCTGTCCGTGAGCGTGC AGAGCGTGCGCCACGCGCTGCGCATCCCGCGCCAGCCGAACGGCTTCGCGCCGATGCTCATGCTCGCGACGTGGAGCGTG TTCATTTTCCTGTTCTTCAGCGCGTCCCATTCGAAGCTGATCTCGTACGTGCTGCCGGTGGCGCCCGCGCTCGCGCTGAT GATCGGCGCGTATCTGCCGCTCGTGTCGCGCGAGCAGTTCCGCCGCCATCTGTTCGGCTACCTGGTATTTCTCGTCGCCG CCGCATTCGGCACGCTTTTCCTCGCGCGGCTGGGCGACGCACGCACGCCGAATTCGCAGTACCTGGAATTCCAGAAATGG GTGTACGTGGCGCTCGCCGCGGCGTTCGCGCTCACGCTCGTCGCCGTCTGGCTCAACCGCCGCGGCCGCGCGGGCGTCGC GGCGGCGGCCGTCGCGTTCGGCGCCGGCTGGCTGCTCCTCGGCACGATCGGCGGCACCGGGCACGACGCGTTCGGCCGCT ACAGCTCGGGCGCGCTCCTCGCGCCCGCGATCCGCGAGGAACTCGCGAAGCTGCCGCCCGACACGCCGTTCTATTCCGTC GAGACGCTCGATCACACGCTGCCGTTCTACGTCGGCCACACGATGATCATGGTCGAGCGCAAGGACGAGCTCACGTTCGG CATCTCGGTCGAGCCGAACAAGTGGGTGCCGACCGTCGCCGAATGGGAGCAGCGCTGGCGCGCCGATCGCCACGCGCTCG CGCTGATGTCGCCCGACCGCTACAAGCAGTTATCGGAGGCCGGCCTGCCGATGCGCGTCGTCGCACGCGACAACCGGCGC GTCGTCGTCGAGAAGCCGCAATCCTGA
Upstream 100 bases:
>100_bases CGCCCCGCTTCGCGCCGCGGCCCGGGCGCCGCGAACGACGGCCGCGAACGACAGCCGCACTCCGCCCCGACCGAATTCGA ACCACTCCAATACGACTTCT
Downstream 100 bases:
>100_bases GCCGCGAAGGACCCGAATCGATGAACCCCGTCTCCCTCTTTTGCATCGTCACGGGCGTGATGCTGAACGCCTGCGCGCAA CTGCTGCTGAAAGCCGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase 2; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase 2 [H]
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MNDTPTRLPLDRAAPVTLNRAALLLLVAALAVIWFAPLGLRHLIPSDEGRYAEMAREMFVTGDWITPRYNGYKYFEKPPL QTWLNALTFAWFGIGEWQARLYTALASFAGVLFAGYAGARVFNPRAGFFAALVLASSPYWNLMGHFNALDMGLSLWMTVT LCALLLAQRPGIGKRAERGWMWLCWASMALAVLSKGLIGLILPGAVLVLYTLASRDWALWKRLHLVSGLVIFFAIATPWF VLVQSRNPEFFNFFFIVQQFRRYLTPEQNRPGAFYYFAPVLAVGFLPWLSVSVQSVRHALRIPRQPNGFAPMLMLATWSV FIFLFFSASHSKLISYVLPVAPALALMIGAYLPLVSREQFRRHLFGYLVFLVAAAFGTLFLARLGDARTPNSQYLEFQKW VYVALAAAFALTLVAVWLNRRGRAGVAAAAVAFGAGWLLLGTIGGTGHDAFGRYSSGALLAPAIREELAKLPPDTPFYSV ETLDHTLPFYVGHTMIMVERKDELTFGISVEPNKWVPTVAEWEQRWRADRHALALMSPDRYKQLSEAGLPMRVVARDNRR VVVEKPQS
Sequences:
>Translated_568_residues MNDTPTRLPLDRAAPVTLNRAALLLLVAALAVIWFAPLGLRHLIPSDEGRYAEMAREMFVTGDWITPRYNGYKYFEKPPL QTWLNALTFAWFGIGEWQARLYTALASFAGVLFAGYAGARVFNPRAGFFAALVLASSPYWNLMGHFNALDMGLSLWMTVT LCALLLAQRPGIGKRAERGWMWLCWASMALAVLSKGLIGLILPGAVLVLYTLASRDWALWKRLHLVSGLVIFFAIATPWF VLVQSRNPEFFNFFFIVQQFRRYLTPEQNRPGAFYYFAPVLAVGFLPWLSVSVQSVRHALRIPRQPNGFAPMLMLATWSV FIFLFFSASHSKLISYVLPVAPALALMIGAYLPLVSREQFRRHLFGYLVFLVAAAFGTLFLARLGDARTPNSQYLEFQKW VYVALAAAFALTLVAVWLNRRGRAGVAAAAVAFGAGWLLLGTIGGTGHDAFGRYSSGALLAPAIREELAKLPPDTPFYSV ETLDHTLPFYVGHTMIMVERKDELTFGISVEPNKWVPTVAEWEQRWRADRHALALMSPDRYKQLSEAGLPMRVVARDNRR VVVEKPQS >Mature_568_residues MNDTPTRLPLDRAAPVTLNRAALLLLVAALAVIWFAPLGLRHLIPSDEGRYAEMAREMFVTGDWITPRYNGYKYFEKPPL QTWLNALTFAWFGIGEWQARLYTALASFAGVLFAGYAGARVFNPRAGFFAALVLASSPYWNLMGHFNALDMGLSLWMTVT LCALLLAQRPGIGKRAERGWMWLCWASMALAVLSKGLIGLILPGAVLVLYTLASRDWALWKRLHLVSGLVIFFAIATPWF VLVQSRNPEFFNFFFIVQQFRRYLTPEQNRPGAFYYFAPVLAVGFLPWLSVSVQSVRHALRIPRQPNGFAPMLMLATWSV FIFLFFSASHSKLISYVLPVAPALALMIGAYLPLVSREQFRRHLFGYLVFLVAAAFGTLFLARLGDARTPNSQYLEFQKW VYVALAAAFALTLVAVWLNRRGRAGVAAAAVAFGAGWLLLGTIGGTGHDAFGRYSSGALLAPAIREELAKLPPDTPFYSV ETLDHTLPFYVGHTMIMVERKDELTFGISVEPNKWVPTVAEWEQRWRADRHALALMSPDRYKQLSEAGLPMRVVARDNRR VVVEKPQS
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=383, Percent_Identity=27.154046997389, Blast_Score=139, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 63679; Mature: 63679
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTPTRLPLDRAAPVTLNRAALLLLVAALAVIWFAPLGLRHLIPSDEGRYAEMAREMFV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH TGDWITPRYNGYKYFEKPPLQTWLNALTFAWFGIGEWQARLYTALASFAGVLFAGYAGAR CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCE VFNPRAGFFAALVLASSPYWNLMGHFNALDMGLSLWMTVTLCALLLAQRPGIGKRAERGW EECCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE MWLCWASMALAVLSKGLIGLILPGAVLVLYTLASRDWALWKRLHLVSGLVIFFAIATPWF EHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCE VLVQSRNPEFFNFFFIVQQFRRYLTPEQNRPGAFYYFAPVLAVGFLPWLSVSVQSVRHAL EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH RIPRQPNGFAPMLMLATWSVFIFLFFSASHSKLISYVLPVAPALALMIGAYLPLVSREQF HCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RRHLFGYLVFLVAAAFGTLFLARLGDARTPNSQYLEFQKWVYVALAAAFALTLVAVWLNR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RGRAGVAAAAVAFGAGWLLLGTIGGTGHDAFGRYSSGALLAPAIREELAKLPPDTPFYSV CCCCHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCCCEECHHHHHHHHHCCCCCCCEEH ETLDHTLPFYVGHTMIMVERKDELTFGISVEPNKWVPTVAEWEQRWRADRHALALMSPDR HHHHCCCHHHHCCEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHEEEECCCHH YKQLSEAGLPMRVVARDNRRVVVEKPQS HHHHHHCCCCEEEEECCCCEEEEECCCC >Mature Secondary Structure MNDTPTRLPLDRAAPVTLNRAALLLLVAALAVIWFAPLGLRHLIPSDEGRYAEMAREMFV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH TGDWITPRYNGYKYFEKPPLQTWLNALTFAWFGIGEWQARLYTALASFAGVLFAGYAGAR CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCE VFNPRAGFFAALVLASSPYWNLMGHFNALDMGLSLWMTVTLCALLLAQRPGIGKRAERGW EECCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE MWLCWASMALAVLSKGLIGLILPGAVLVLYTLASRDWALWKRLHLVSGLVIFFAIATPWF EHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCE VLVQSRNPEFFNFFFIVQQFRRYLTPEQNRPGAFYYFAPVLAVGFLPWLSVSVQSVRHAL EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH RIPRQPNGFAPMLMLATWSVFIFLFFSASHSKLISYVLPVAPALALMIGAYLPLVSREQF HCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RRHLFGYLVFLVAAAFGTLFLARLGDARTPNSQYLEFQKWVYVALAAAFALTLVAVWLNR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RGRAGVAAAAVAFGAGWLLLGTIGGTGHDAFGRYSSGALLAPAIREELAKLPPDTPFYSV CCCCHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCCCEECHHHHHHHHHCCCCCCCEEH ETLDHTLPFYVGHTMIMVERKDELTFGISVEPNKWVPTVAEWEQRWRADRHALALMSPDR HHHHCCCHHHHCCEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHEEEECCCHH YKQLSEAGLPMRVVARDNRRVVVEKPQS HHHHHHCCCCEEEEECCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA