| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is bcp [H]
Identifier: 53719103
GI number: 53719103
Start: 1703337
End: 1703798
Strand: Reverse
Name: bcp [H]
Synonym: BPSL1467
Alternate gene names: 53719103
Gene position: 1703798-1703337 (Counterclockwise)
Preceding gene: 53719104
Following gene: 53719102
Centisome position: 41.82
GC content: 61.47
Gene sequence:
>462_bases GTGTCTGTCGAAGTCGACCGCCAAGTTCCCGATTTCACTGCGCCCGCCACGGGCGGCGAGTTTTCGCTGTCGGGCATCAA GGGCAAGAAGCTCGTGCTGTACTTCTACCCGAAGGACAACACGCCCGGCTGCACGACCGAGGGCCTGCAGTTCCGCGACC TGTATCCGAAGTTCAAGAAAGCCGGCGCGGAAATCGTCGGCGTGTCGCGCGACAGCCTGCGCTCGCACGAGAACTTCAAG GCGAAGCTCGAACTGCCGTTCCCGTTGATTTCGGACCCCGATGAAACGCTCTGCGCGCTGTTCGGCGTCATGAAACTGAA GAAAATGTATGGTAAGGAAGTGCGCGGAATCGAGCGCTCGACGTTCCTGATCGACGGCGCAGGCATGCTGCGCCACGCAT GGCGCGGCGTGAAGGTGCCGGGCCATGTCGACGACGTGCTGAGCGCTGTACAAGCGCTTTGA
Upstream 100 bases:
>100_bases AGCCCGACTGAACGAAAGCCGGTGCCGGCTTTCGCTTCTCATCCCGCATCGCCACGCGCGGCTCGCCGTCCGCGCTCGTT CATAACAACAGGAGAAACAC
Downstream 100 bases:
>100_bases GGCGCGTTATATTGGGCCGCAATGAATGCCTGTCCGACCCATTTTTCTCGTAGCTGCGCCGGTGGTCCAAACGATGCGCC CACGCGCCTGACGCGCAGCA
Product: putative bacterioferritin comigratory protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSVEVDRQVPDFTAPATGGEFSLSGIKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEIVGVSRDSLRSHENFK AKLELPFPLISDPDETLCALFGVMKLKKMYGKEVRGIERSTFLIDGAGMLRHAWRGVKVPGHVDDVLSAVQAL
Sequences:
>Translated_153_residues MSVEVDRQVPDFTAPATGGEFSLSGIKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEIVGVSRDSLRSHENFK AKLELPFPLISDPDETLCALFGVMKLKKMYGKEVRGIERSTFLIDGAGMLRHAWRGVKVPGHVDDVLSAVQAL >Mature_152_residues SVEVDRQVPDFTAPATGGEFSLSGIKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEIVGVSRDSLRSHENFKA KLELPFPLISDPDETLCALFGVMKLKKMYGKEVRGIERSTFLIDGAGMLRHAWRGVKVPGHVDDVLSAVQAL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI4505591, Length=165, Percent_Identity=33.9393939393939, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI32455266, Length=165, Percent_Identity=33.9393939393939, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI32455264, Length=165, Percent_Identity=33.9393939393939, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI32189392, Length=164, Percent_Identity=34.7560975609756, Blast_Score=71, Evalue=5e-13, Organism=Escherichia coli, GI1788825, Length=143, Percent_Identity=38.4615384615385, Blast_Score=105, Evalue=9e-25, Organism=Caenorhabditis elegans, GI17554494, Length=157, Percent_Identity=34.3949044585987, Blast_Score=63, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322180, Length=106, Percent_Identity=35.8490566037736, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI17738015, Length=164, Percent_Identity=34.7560975609756, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16891; Mature: 16760
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEVDRQVPDFTAPATGGEFSLSGIKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKK CCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH AGAEIVGVSRDSLRSHENFKAKLELPFPLISDPDETLCALFGVMKLKKMYGKEVRGIERS CCCEEEECCHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC TFLIDGAGMLRHAWRGVKVPGHVDDVLSAVQAL EEEEECCHHHHHHHCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SVEVDRQVPDFTAPATGGEFSLSGIKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKK CCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH AGAEIVGVSRDSLRSHENFKAKLELPFPLISDPDETLCALFGVMKLKKMYGKEVRGIERS CCCEEEECCHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC TFLIDGAGMLRHAWRGVKVPGHVDDVLSAVQAL EEEEECCHHHHHHHCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]