| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is ylaK [H]
Identifier: 53719102
GI number: 53719102
Start: 1701212
End: 1702603
Strand: Reverse
Name: ylaK [H]
Synonym: BPSL1466
Alternate gene names: 53719102
Gene position: 1702603-1701212 (Counterclockwise)
Preceding gene: 53719103
Following gene: 53719101
Centisome position: 41.79
GC content: 65.59
Gene sequence:
>1392_bases ATGCAAAAACTCTTCGTGCTCGACACGAACGTGCTGATGCATGATCCGAGCAGCCTGTTCCGCTTCGAGGAGCACGACGT CTATCTGCCGATGATGACGCTCGAGGAGCTCGACAATCACAAGAAGGGCATGTCGGAAGTCGCGCGCAACGCGCGCCAGG TGAGCCGCACGCTCGACTCGCTCGTCGCCGATGCGGGCCCGATCTCGGCCGGCATTCCGCTCGCGCGCCTCGGCAGCCGC GAGGCGCTCGGCCGCCTGTATTTCCAGACCACGCTCACGAGCATCGAGCCTGTCGAGGGCCTGCCGCAGGGCAAGGCCGA CAACCAGATCCTGGGCGTCGTGCGCGCGCTGCAGCGCGAGCGGCCCGATCGGCAGGTCGTGCTGGTGTCGAAAGACATCA ACATGCGGGTCAAGGCGCACGCGCTCGGCCTGCCCGCCGAGGACTACTTCAACGATCAGGTTCTCGAAGACAAGGATCTG CTCTACTCCGGCGTGCGCGAACTGCCGCAGGACTTCTGGACGAAGCACGCGAAGGGGATGGAGAGCTGGCAGGACACGAA GACGGGCACGACGTACTACCGCGTGACGGGCCCGCTCGTCGCGTCGATGCTCGTCAACGAGTTCGCCTATCTCGAGCCGC AGAACGGCGAGCCCGCGTTCCACGCGATCGTGCGCGAGCTGAACGGCAAGACGGCGCTGTTGCAGACGCTGCGCGACTAC AGCCACCACAAGAACAACGTGTGGGGCATCACCGCGCGCAACCGCGAGCAGAATTTCGCGCTGAACCTGCTGATGAACCC CGAGATCGACTTCGTCACGCTGCTCGGCCAGGCCGGCACCGGCAAGACGCTCGTCGCGCTCGCGGCGGGCTTGGCGCAGG TGCTCGACGACAAGCGCTACAACGAGATCATCGTCACGCGCGCGACCGTGCCGGTGGGCGAGGACATCGGCTTCCTGCCC GGCACCGAGGAAGAGAAGATGCAGCCGTGGATGGGCGCGTTCGACGACAACCTCGAAGTGCTGCAGAAAACCGACGACGC GGCGGGCGAATGGGGCCGCGCGGCGACGCAGGAGCTGATCCGCTCGCGCCTGAAGGTCAAGAGCATGAACTTCATGCGCG GCCGCACGTTCGTCGACAAGTACGTGATCATCGACGAGGCGCAGAACCTCACGCCCAAGCAGATGAAAACGCTCGTCACG CGCGCGGGCCCCGGCACGAAGATCATCTGCCTCGGCAACATCGCGCAGATCGACACGCCGTACCTGACGGAAGGCAGCTC GGGCCTCACGTACGTCGTCGATCGCTTCAAGGGCTGGGGCCACAGCGGCCACGTGACGCTCGCGCGCGGCGAGCGCTCAC GGCTGGCCGATTACGCGTCCGACATCCTGTAA
Upstream 100 bases:
>100_bases GCGCTCGTCGAAGACCGATGCGGCGAAGCCCGCGGCAGCCGCGCCCGCCGCGCCGCGCCCGGCCGCGAAAACGCGCGGCC GCAAGGACGCCGAAGTCGAG
Downstream 100 bases:
>100_bases CGCCGTGCCGGCCGCCGCGCCGAGCGGTTCCCGGCATCCCGCGGCGCCTGATTCGTCAGGCGCCGTTTTTATATGGGGGC CGAATCGTCACCGCGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MQKLFVLDTNVLMHDPSSLFRFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDSLVADAGPISAGIPLARLGSR EALGRLYFQTTLTSIEPVEGLPQGKADNQILGVVRALQRERPDRQVVLVSKDINMRVKAHALGLPAEDYFNDQVLEDKDL LYSGVRELPQDFWTKHAKGMESWQDTKTGTTYYRVTGPLVASMLVNEFAYLEPQNGEPAFHAIVRELNGKTALLQTLRDY SHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLP GTEEEKMQPWMGAFDDNLEVLQKTDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYVIIDEAQNLTPKQMKTLVT RAGPGTKIICLGNIAQIDTPYLTEGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL
Sequences:
>Translated_463_residues MQKLFVLDTNVLMHDPSSLFRFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDSLVADAGPISAGIPLARLGSR EALGRLYFQTTLTSIEPVEGLPQGKADNQILGVVRALQRERPDRQVVLVSKDINMRVKAHALGLPAEDYFNDQVLEDKDL LYSGVRELPQDFWTKHAKGMESWQDTKTGTTYYRVTGPLVASMLVNEFAYLEPQNGEPAFHAIVRELNGKTALLQTLRDY SHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLP GTEEEKMQPWMGAFDDNLEVLQKTDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYVIIDEAQNLTPKQMKTLVT RAGPGTKIICLGNIAQIDTPYLTEGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL >Mature_463_residues MQKLFVLDTNVLMHDPSSLFRFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDSLVADAGPISAGIPLARLGSR EALGRLYFQTTLTSIEPVEGLPQGKADNQILGVVRALQRERPDRQVVLVSKDINMRVKAHALGLPAEDYFNDQVLEDKDL LYSGVRELPQDFWTKHAKGMESWQDTKTGTTYYRVTGPLVASMLVNEFAYLEPQNGEPAFHAIVRELNGKTALLQTLRDY SHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLP GTEEEKMQPWMGAFDDNLEVLQKTDDAAGEWGRAATQELIRSRLKVKSMNFMRGRTFVDKYVIIDEAQNLTPKQMKTLVT RAGPGTKIICLGNIAQIDTPYLTEGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=191, Percent_Identity=37.17277486911, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI145693103, Length=162, Percent_Identity=37.6543209876543, Blast_Score=89, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 51733; Mature: 51733
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLFVLDTNVLMHDPSSLFRFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDS CCEEEEEECCEEEECCHHHHEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVADAGPISAGIPLARLGSREALGRLYFQTTLTSIEPVEGLPQGKADNQILGVVRALQRE HHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHC RPDRQVVLVSKDINMRVKAHALGLPAEDYFNDQVLEDKDLLYSGVRELPQDFWTKHAKGM CCCCEEEEEECCCCEEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ESWQDTKTGTTYYRVTGPLVASMLVNEFAYLEPQNGEPAFHAIVRELNGKTALLQTLRDY HHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH SHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRY HCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCC NEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVLQKTDDAAGEWGRAATQELI CEEEEEEECCCCCCCCCCCCCCCHHHCCCHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHH RSRLKVKSMNFMRGRTFVDKYVIIDEAQNLTPKQMKTLVTRAGPGTKIICLGNIAQIDTP HHHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHCCCC YLTEGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL CCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MQKLFVLDTNVLMHDPSSLFRFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDS CCEEEEEECCEEEECCHHHHEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVADAGPISAGIPLARLGSREALGRLYFQTTLTSIEPVEGLPQGKADNQILGVVRALQRE HHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHC RPDRQVVLVSKDINMRVKAHALGLPAEDYFNDQVLEDKDLLYSGVRELPQDFWTKHAKGM CCCCEEEEEECCCCEEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ESWQDTKTGTTYYRVTGPLVASMLVNEFAYLEPQNGEPAFHAIVRELNGKTALLQTLRDY HHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH SHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRY HCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCC NEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNLEVLQKTDDAAGEWGRAATQELI CEEEEEEECCCCCCCCCCCCCCCHHHCCCHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHH RSRLKVKSMNFMRGRTFVDKYVIIDEAQNLTPKQMKTLVTRAGPGTKIICLGNIAQIDTP HHHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHCCCC YLTEGSSGLTYVVDRFKGWGHSGHVTLARGERSRLADYASDIL CCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]