| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718534
Identifier: 53718534
GI number: 53718534
Start: 1042163
End: 1042672
Strand: Reverse
Name: 53718534
Synonym: BPSL0894
Alternate gene names: NA
Gene position: 1042672-1042163 (Counterclockwise)
Preceding gene: 53718535
Following gene: 53718533
Centisome position: 25.59
GC content: 67.06
Gene sequence:
>510_bases GTGCGATCTTCCCCGCGCTCTTCGCTCGCCCGACTCGCGCGAGCCGCCGTCTTTCCGGTCGCGCTCGCGCTCGCCGCGAG CGGCATGCACGCCGCGTTCGCGCAAACCACGCCGCTGCCGCCCGGCGCGAAGCAACCGAGCGAATTCCCGCGCGTGAAGC TGCGCGCCGGCATGTACGTGATCGACGCGGCCGTCGCGGCGAACGACGCCGACCGCGAACAGGGCCTCATGTACCGCTCG CGGCTCGCGCCGAACGAAGGGATGCTGTTCGTGTTCAACGAGAACGCCGTGCATTGCTTCTGGATGAAAAACACGCTGAT CCCGCTGTCGATCGCGTTCATCCGCGCGGACGGCACGATCACCGACATCGACGAAATGAAGGCCGAGACGACCGACAATC ACTGCCCGCGCAACAACGGCGTCTATGCGCTCGAGATGAGCAGCGGCTGGTTCGCCGCGAAGGGCGTGAAGCCCGGCATG AAGATCGACGGGCTGCCGAAGCCGCAGTGA
Upstream 100 bases:
>100_bases TTTTTGCCGCCCTCGCCCGCCCGAGCCCGCGCCCTGCCTGCGCGCGACGCCGCGCTTCGCGTACCATGCGGGTCTCGCAT TCCCGATAGGAGCCCCAGCC
Downstream 100 bases:
>100_bases CGCCCGGTGCGCGCGGCCGGCGCATGCCGCGCGTGCCCCGCGCCCTTGCCGCCCGAGCGCCGGCCGCGCGCCGGCTTTTT TGCGCGCCGCTGCCGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Lipoprotein; Secreted Protein
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MRSSPRSSLARLARAAVFPVALALAASGMHAAFAQTTPLPPGAKQPSEFPRVKLRAGMYVIDAAVAANDADREQGLMYRS RLAPNEGMLFVFNENAVHCFWMKNTLIPLSIAFIRADGTITDIDEMKAETTDNHCPRNNGVYALEMSSGWFAAKGVKPGM KIDGLPKPQ
Sequences:
>Translated_169_residues MRSSPRSSLARLARAAVFPVALALAASGMHAAFAQTTPLPPGAKQPSEFPRVKLRAGMYVIDAAVAANDADREQGLMYRS RLAPNEGMLFVFNENAVHCFWMKNTLIPLSIAFIRADGTITDIDEMKAETTDNHCPRNNGVYALEMSSGWFAAKGVKPGM KIDGLPKPQ >Mature_169_residues MRSSPRSSLARLARAAVFPVALALAASGMHAAFAQTTPLPPGAKQPSEFPRVKLRAGMYVIDAAVAANDADREQGLMYRS RLAPNEGMLFVFNENAVHCFWMKNTLIPLSIAFIRADGTITDIDEMKAETTDNHCPRNNGVYALEMSSGWFAAKGVKPGM KIDGLPKPQ
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18321; Mature: 18321
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSPRSSLARLARAAVFPVALALAASGMHAAFAQTTPLPPGAKQPSEFPRVKLRAGMYV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCEEE IDAAVAANDADREQGLMYRSRLAPNEGMLFVFNENAVHCFWMKNTLIPLSIAFIRADGTI EEEEHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCE TDIDEMKAETTDNHCPRNNGVYALEMSSGWFAAKGVKPGMKIDGLPKPQ ECHHHHHCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MRSSPRSSLARLARAAVFPVALALAASGMHAAFAQTTPLPPGAKQPSEFPRVKLRAGMYV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCEEE IDAAVAANDADREQGLMYRSRLAPNEGMLFVFNENAVHCFWMKNTLIPLSIAFIRADGTI EEEEHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCE TDIDEMKAETTDNHCPRNNGVYALEMSSGWFAAKGVKPGMKIDGLPKPQ ECHHHHHCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA