| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yjeE [H]
Identifier: 53718499
GI number: 53718499
Start: 1000553
End: 1001107
Strand: Reverse
Name: yjeE [H]
Synonym: BPSL0860
Alternate gene names: 53718499
Gene position: 1001107-1000553 (Counterclockwise)
Preceding gene: 53718503
Following gene: 53718498
Centisome position: 24.57
GC content: 69.19
Gene sequence:
>555_bases ATGCCCGAGCAGCCTAGCCACGCGCACGCCGCGCCCCCCCTGCCCGCTCCGCTTGCCGAACGCACGCTCGCGCTCGCCGA CGAAGCGGCGACGATCGCGCTCGGCGAACGCCTCGCGCACGCGCTCGACGCGATGCGCGGCGCGCGCGCCGCCGCGCATG CGTTCGACGGCCTGCAGATCCAGCTGTACGGCGATCTCGGCGCCGGCAAGACGACGCTCGTGCGCGCGATGCTGCGCGGC CTCGGCCACGCGGGCCGCGTGAAGAGCCCGACCTACACGCTCGTCGAACCATACGCGCTCGCGCGTTCCGATGGGGAACT CGAGGTCTATCACTTCGATCTGTACCGTTTTAGCGATCCGGCCGAATGGGCCGACGCGGGCTTTCGCGAATATTTCAATT CCGGCGCGATCTGCATCGTCGAATGGCCGCAACGGGCGGGCGCGCTCCTTGGCGTGCCGGATCTCGTGTTCTCGCTCGAC GTGGCGGGCGAAGGCCGCCTGCTCACCGCCCGGGCGTACAGCGCATCAGGAAAGGCATGTCTCGAAAGATGTTGA
Upstream 100 bases:
>100_bases GCGTCGTCGAGGCGAGACGGCGCGGCGCGCCCGTCCTGCGAGGGGCGCGCATCTGCGATTGCGAGTTCCGGATTGCGGTC CATCGCGTTATTTTACGAGA
Downstream 100 bases:
>100_bases TCAAACCGTTCCGCTCGATCGAATCGGCGGCCACCGCGACCCATAACTGGCGGCGCCGGCAGATCCTGCGCGCCGGCGCG TCGACGCTCGTGCTCGGGCT
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MPEQPSHAHAAPPLPAPLAERTLALADEAATIALGERLAHALDAMRGARAAAHAFDGLQIQLYGDLGAGKTTLVRAMLRG LGHAGRVKSPTYTLVEPYALARSDGELEVYHFDLYRFSDPAEWADAGFREYFNSGAICIVEWPQRAGALLGVPDLVFSLD VAGEGRLLTARAYSASGKACLERC
Sequences:
>Translated_184_residues MPEQPSHAHAAPPLPAPLAERTLALADEAATIALGERLAHALDAMRGARAAAHAFDGLQIQLYGDLGAGKTTLVRAMLRG LGHAGRVKSPTYTLVEPYALARSDGELEVYHFDLYRFSDPAEWADAGFREYFNSGAICIVEWPQRAGALLGVPDLVFSLD VAGEGRLLTARAYSASGKACLERC >Mature_183_residues PEQPSHAHAAPPLPAPLAERTLALADEAATIALGERLAHALDAMRGARAAAHAFDGLQIQLYGDLGAGKTTLVRAMLRGL GHAGRVKSPTYTLVEPYALARSDGELEVYHFDLYRFSDPAEWADAGFREYFNSGAICIVEWPQRAGALLGVPDLVFSLDV AGEGRLLTARAYSASGKACLERC
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=166, Percent_Identity=48.7951807228916, Blast_Score=145, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 19661; Mature: 19529
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEQPSHAHAAPPLPAPLAERTLALADEAATIALGERLAHALDAMRGARAAAHAFDGLQI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE QLYGDLGAGKTTLVRAMLRGLGHAGRVKSPTYTLVEPYALARSDGELEVYHFDLYRFSDP EEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHCCCCCEEEEEEEEEEECCC AEWADAGFREYFNSGAICIVEWPQRAGALLGVPDLVFSLDVAGEGRLLTARAYSASGKAC HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHEEEEECCCCCEEEEEEECCCCCHHH LERC HHCC >Mature Secondary Structure PEQPSHAHAAPPLPAPLAERTLALADEAATIALGERLAHALDAMRGARAAAHAFDGLQI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE QLYGDLGAGKTTLVRAMLRGLGHAGRVKSPTYTLVEPYALARSDGELEVYHFDLYRFSDP EEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHCCCCCEEEEEEEEEEECCC AEWADAGFREYFNSGAICIVEWPQRAGALLGVPDLVFSLDVAGEGRLLTARAYSASGKAC HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHEEEEECCCCCEEEEEEECCCCCHHH LERC HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]