Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53718382

Identifier: 53718382

GI number: 53718382

Start: 855653

End: 856495

Strand: Reverse

Name: 53718382

Synonym: BPSL0742

Alternate gene names: NA

Gene position: 856495-855653 (Counterclockwise)

Preceding gene: 53718383

Following gene: 53718381

Centisome position: 21.02

GC content: 57.77

Gene sequence:

>843_bases
GTGAATTCGATCAGAGACCTTTTGAACGGGGTTCGGCGGCATCCAGTGAAGATGCTCGCCTACATGTTCACGGCATTCAG
CATCATTCAAACGGTTGTTCGTGGTGTTTCCCTGTTCGTCCCGGGAATTTCCATCAGCGGCCCGATTCCTTTCGCCGCCG
TGATCGTCATCAGCGTCTCGTGGGGCTTGAAAAAGGTTTGGAAGCCATCCCGCATCGAATTGCCGATCGCCAATTGCGCG
ACCGTGATCGAAGTCGTTTTCGGTGATCTGTTCGAGCAAGAGGGCATTCGAGCCATCGCGGTCAACAATTTTTTTGACAG
CGCGCTTGGCAAACCCGTTTCCGACAAGAGCGTGCACGGGATTTTTCTGAAAAAGTGCTTTGGCGGCCACGCTGAGCCCT
TCGACAAGCAAGTGGACGAGCAGCTCGCCGCGATCGAGAGCGAAAGCGTCGAGCGCGCGGAAGGGAAGACAAAGCGCTTT
CCGATTGGCTCGACCGCCATGATCAATGTCAACCAAGACCGCTACATCGCTTTCGCCTTCGCGGAGACCGACCCCGCGAC
CAGCAAAGCGCATTCGGACGTGACCATGATGTGGTCGGCCCTGCACTCCCTCTGGGAGCGCGCCCGCGTCGAGGCGGGCG
GGCACTCGCTGAACCTTCCTTTGGTCGGAAGCGGCCTGTCCGGCTTGGGCCTGCCAACCCGCGACCTGTTGAACCTCATC
ATTTTGTCGGCGATCACCGAGACGAAAACCCGAGAGGTCACGCAGAGAATCAGAATTGTCTTGGGCCGAGACCGATTCGA
CCACCTCGATTTGCGGGACGTGAAAGCGCATTGGAGCGAATGA

Upstream 100 bases:

>100_bases
CTGACAACGGGGTTTCGACGGGAATAAACAGCGCCTAAAATGTCTTTCGGGCCGGACGACAACGGCCAAAAATGACTAAC
GCCAAGACCAGGCGAAAAGA

Downstream 100 bases:

>100_bases
CATGGCTTACAGAAACGGGACCTATGTGGCGTTCCATGCCAACGGCACCAACCGACCGGGCGGAAACTCCGACATCGACT
ACTACAACCTGTTGAAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNSIRDLLNGVRRHPVKMLAYMFTAFSIIQTVVRGVSLFVPGISISGPIPFAAVIVISVSWGLKKVWKPSRIELPIANCA
TVIEVVFGDLFEQEGIRAIAVNNFFDSALGKPVSDKSVHGIFLKKCFGGHAEPFDKQVDEQLAAIESESVERAEGKTKRF
PIGSTAMINVNQDRYIAFAFAETDPATSKAHSDVTMMWSALHSLWERARVEAGGHSLNLPLVGSGLSGLGLPTRDLLNLI
ILSAITETKTREVTQRIRIVLGRDRFDHLDLRDVKAHWSE

Sequences:

>Translated_280_residues
MNSIRDLLNGVRRHPVKMLAYMFTAFSIIQTVVRGVSLFVPGISISGPIPFAAVIVISVSWGLKKVWKPSRIELPIANCA
TVIEVVFGDLFEQEGIRAIAVNNFFDSALGKPVSDKSVHGIFLKKCFGGHAEPFDKQVDEQLAAIESESVERAEGKTKRF
PIGSTAMINVNQDRYIAFAFAETDPATSKAHSDVTMMWSALHSLWERARVEAGGHSLNLPLVGSGLSGLGLPTRDLLNLI
ILSAITETKTREVTQRIRIVLGRDRFDHLDLRDVKAHWSE
>Mature_280_residues
MNSIRDLLNGVRRHPVKMLAYMFTAFSIIQTVVRGVSLFVPGISISGPIPFAAVIVISVSWGLKKVWKPSRIELPIANCA
TVIEVVFGDLFEQEGIRAIAVNNFFDSALGKPVSDKSVHGIFLKKCFGGHAEPFDKQVDEQLAAIESESVERAEGKTKRF
PIGSTAMINVNQDRYIAFAFAETDPATSKAHSDVTMMWSALHSLWERARVEAGGHSLNLPLVGSGLSGLGLPTRDLLNLI
ILSAITETKTREVTQRIRIVLGRDRFDHLDLRDVKAHWSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30892; Mature: 30892

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIRDLLNGVRRHPVKMLAYMFTAFSIIQTVVRGVSLFVPGISISGPIPFAAVIVISVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
WGLKKVWKPSRIELPIANCATVIEVVFGDLFEQEGIRAIAVNNFFDSALGKPVSDKSVHG
HHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCHHH
IFLKKCFGGHAEPFDKQVDEQLAAIESESVERAEGKTKRFPIGSTAMINVNQDRYIAFAF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEE
AETDPATSKAHSDVTMMWSALHSLWERARVEAGGHSLNLPLVGSGLSGLGLPTRDLLNLI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEECCCCCCCCCHHHHHHHH
ILSAITETKTREVTQRIRIVLGRDRFDHLDLRDVKAHWSE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MNSIRDLLNGVRRHPVKMLAYMFTAFSIIQTVVRGVSLFVPGISISGPIPFAAVIVISVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
WGLKKVWKPSRIELPIANCATVIEVVFGDLFEQEGIRAIAVNNFFDSALGKPVSDKSVHG
HHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCHHH
IFLKKCFGGHAEPFDKQVDEQLAAIESESVERAEGKTKRFPIGSTAMINVNQDRYIAFAF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEE
AETDPATSKAHSDVTMMWSALHSLWERARVEAGGHSLNLPLVGSGLSGLGLPTRDLLNLI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEECCCCCCCCCHHHHHHHH
ILSAITETKTREVTQRIRIVLGRDRFDHLDLRDVKAHWSE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA