| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718381
Identifier: 53718381
GI number: 53718381
Start: 855094
End: 855651
Strand: Reverse
Name: 53718381
Synonym: BPSL0741
Alternate gene names: NA
Gene position: 855651-855094 (Counterclockwise)
Preceding gene: 53718382
Following gene: 53718380
Centisome position: 21.0
GC content: 54.48
Gene sequence:
>558_bases ATGGCTTACAGAAACGGGACCTATGTGGCGTTCCATGCCAACGGCACCAACCGACCGGGCGGAAACTCCGACATCGACTA CTACAACCTGTTGAAGGCGTGGGTCGGCAAAGACGACGACCATTTCACGATGAACAACAGCCATGACAAGGCGTCTGCTG TCCGCGATTCGAGCAAGAAGGAAACCTTGCGGGCCTCGCTTCTCGAGCGCCTGAGAAACTCAAAGAACATGGTGCTCATC ATCGGGGACACAACTCTTCTGGACGACGATTGGGTCCCTTTTGAAATCTCGTCGGCCGTGGACACATACGAGATTCCCAT CATCGCCGTCTACACCCAATACTCGACCCCGATACGAAATCCTGCGGCGTTGCGCTCGCGGTGGCCCGACGCCCTCGCGA CCCGGATCGATTCGCAAAAAGCCAAAGTCATACACATTCCATTCAAAAAGGCGGCGCTAAACGACGCTATATCGCAGTTC TCCCACAACAATATGCCGAAGGGACCGCTATCCTTTTATAGCGACGAGGCCTACGAAAGCTTCGGAATTGACGGATAA
Upstream 100 bases:
>100_bases AAAACCCGAGAGGTCACGCAGAGAATCAGAATTGTCTTGGGCCGAGACCGATTCGACCACCTCGATTTGCGGGACGTGAA AGCGCATTGGAGCGAATGAC
Downstream 100 bases:
>100_bases CGGCTCGCCCGCGCGAACGCGTCGCCACGGGTCAAGGGCGGGCGCAGCCCGGCGAAGCGCACCCTTGACGCGCCGCCCGA GCGGACAATGACGAAGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MAYRNGTYVAFHANGTNRPGGNSDIDYYNLLKAWVGKDDDHFTMNNSHDKASAVRDSSKKETLRASLLERLRNSKNMVLI IGDTTLLDDDWVPFEISSAVDTYEIPIIAVYTQYSTPIRNPAALRSRWPDALATRIDSQKAKVIHIPFKKAALNDAISQF SHNNMPKGPLSFYSDEAYESFGIDG
Sequences:
>Translated_185_residues MAYRNGTYVAFHANGTNRPGGNSDIDYYNLLKAWVGKDDDHFTMNNSHDKASAVRDSSKKETLRASLLERLRNSKNMVLI IGDTTLLDDDWVPFEISSAVDTYEIPIIAVYTQYSTPIRNPAALRSRWPDALATRIDSQKAKVIHIPFKKAALNDAISQF SHNNMPKGPLSFYSDEAYESFGIDG >Mature_184_residues AYRNGTYVAFHANGTNRPGGNSDIDYYNLLKAWVGKDDDHFTMNNSHDKASAVRDSSKKETLRASLLERLRNSKNMVLII GDTTLLDDDWVPFEISSAVDTYEIPIIAVYTQYSTPIRNPAALRSRWPDALATRIDSQKAKVIHIPFKKAALNDAISQFS HNNMPKGPLSFYSDEAYESFGIDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20750; Mature: 20619
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYRNGTYVAFHANGTNRPGGNSDIDYYNLLKAWVGKDDDHFTMNNSHDKASAVRDSSKK CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHCCHHH ETLRASLLERLRNSKNMVLIIGDTTLLDDDWVPFEISSAVDTYEIPIIAVYTQYSTPIRN HHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCEEECCCCCEECCCEEEEEECCCCCCCC PAALRSRWPDALATRIDSQKAKVIHIPFKKAALNDAISQFSHNNMPKGPLSFYSDEAYES HHHHHHCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH FGIDG CCCCC >Mature Secondary Structure AYRNGTYVAFHANGTNRPGGNSDIDYYNLLKAWVGKDDDHFTMNNSHDKASAVRDSSKK CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHCCHHH ETLRASLLERLRNSKNMVLIIGDTTLLDDDWVPFEISSAVDTYEIPIIAVYTQYSTPIRN HHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCEEECCCCCEECCCEEEEEECCCCCCCC PAALRSRWPDALATRIDSQKAKVIHIPFKKAALNDAISQFSHNNMPKGPLSFYSDEAYES HHHHHHCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH FGIDG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA