| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718307
Identifier: 53718307
GI number: 53718307
Start: 755219
End: 756064
Strand: Reverse
Name: 53718307
Synonym: BPSL0664
Alternate gene names: NA
Gene position: 756064-755219 (Counterclockwise)
Preceding gene: 53718308
Following gene: 53718305
Centisome position: 18.56
GC content: 68.68
Gene sequence:
>846_bases GTGGCTCTCGATCACCGCCAGCTCGACCTGCCGCTCTTCGACGGGCCGGCCGCCTCGCCGTCCCCCGCTTCCCCGCCCGC CGCACCGCCCGCCTCGTCCGCGACGCCGCCTGAAGCCGACCGCTCCCGCCGCCGCACGGTCGCGCTCGACGGCCGCGCGC TCGAATACAAGCTCAAGCGCTCCGCGCGTCGCACGATCGGCTTCGCGATCGACGGCAGCGGGCTCACGATCACCGCGCCG CGCTGGGTGACGCTCGCCGACATCGAAGCGGCGATCGCCGAGAAGCGCCGCTGGATCTTCAACAAGCTCGCCGAATGGCA GACGCGCGCCGAGCAGCGCGCGCTACCGCAGATCGACTGGAAGGAAGGCGCGCAGATTCCGTATCTCGGCAAGCCCGTGA GCATCGCGCTCGCGTCGGCGAAGGGCGCGCTCAGCTTCGATCCGCTCGCCGCGACGCTCGAGCTCGGGCTGCCCGCGCAT GCGAGCGAGCAGCAGATCAAGGATCGCGTGCAGGGCTGGCTGCAGGGCGAAGCCAAGCGGATCTTCGGCGAGCGGCTCGT CGTGTACGCGGAGAAGCTCGGCGTCACGTATTCGATGTATGCGCTGTCGTCGGCCGCGACGCGCTGGGGCAGTTGCTCGA GCGACGGCAAGATCCGCCTGAACTGGCGGCTCATCCACTTCCCGATGTCGATCGTCGATTATGTCGTCGCGCACGAGCTG TCGCATCTGCGCGAGATGAACCATAGCCCGGCGTTCTGGCAGACGGTCGAATCGATTTTTCCGGAATTCCGCGAAGCGCG GCACACGCTCAAGCATCATCCGCCGGAGCTGCTGCCGGCGCTTTGA
Upstream 100 bases:
>100_bases CCGACGCCGCGCATCCCTGAAGTCAAGCGAGTTTCACCCATTGCGCACTGCCAAACGAAGCGAACTGATGCCGAAGCGTC CCAGGCCACGGCCGGCCGTC
Downstream 100 bases:
>100_bases GCGGCACGGCACGCCCTTGCCCGACGATCGCGCCTTCGGCCGAATTCGCGCCGGGGAGCATTCTGGCTTTGCCGACCGCG CGCCTTGCCGGTCACGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc-Dependent Protease; Zinc Protease; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidases-Like Protein; Peptidase; Hydrolase; Zinc Metallopeptidase Protein; Protease; Zinc Metallo Protease
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MALDHRQLDLPLFDGPAASPSPASPPAAPPASSATPPEADRSRRRTVALDGRALEYKLKRSARRTIGFAIDGSGLTITAP RWVTLADIEAAIAEKRRWIFNKLAEWQTRAEQRALPQIDWKEGAQIPYLGKPVSIALASAKGALSFDPLAATLELGLPAH ASEQQIKDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKIRLNWRLIHFPMSIVDYVVAHEL SHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPAL
Sequences:
>Translated_281_residues MALDHRQLDLPLFDGPAASPSPASPPAAPPASSATPPEADRSRRRTVALDGRALEYKLKRSARRTIGFAIDGSGLTITAP RWVTLADIEAAIAEKRRWIFNKLAEWQTRAEQRALPQIDWKEGAQIPYLGKPVSIALASAKGALSFDPLAATLELGLPAH ASEQQIKDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKIRLNWRLIHFPMSIVDYVVAHEL SHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPAL >Mature_280_residues ALDHRQLDLPLFDGPAASPSPASPPAAPPASSATPPEADRSRRRTVALDGRALEYKLKRSARRTIGFAIDGSGLTITAPR WVTLADIEAAIAEKRRWIFNKLAEWQTRAEQRALPQIDWKEGAQIPYLGKPVSIALASAKGALSFDPLAATLELGLPAHA SEQQIKDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKIRLNWRLIHFPMSIVDYVVAHELS HLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPAL
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31209; Mature: 31078
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDHRQLDLPLFDGPAASPSPASPPAAPPASSATPPEADRSRRRTVALDGRALEYKLKR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCHHHHHHHH SARRTIGFAIDGSGLTITAPRWVTLADIEAAIAEKRRWIFNKLAEWQTRAEQRALPQIDW HHHHHEEEEEECCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KEGAQIPYLGKPVSIALASAKGALSFDPLAATLELGLPAHASEQQIKDRVQGWLQGEAKR CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH IFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKIRLNWRLIHFPMSIVDYVVAHEL HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHH SHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPAL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC >Mature Secondary Structure ALDHRQLDLPLFDGPAASPSPASPPAAPPASSATPPEADRSRRRTVALDGRALEYKLKR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCHHHHHHHH SARRTIGFAIDGSGLTITAPRWVTLADIEAAIAEKRRWIFNKLAEWQTRAEQRALPQIDW HHHHHEEEEEECCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KEGAQIPYLGKPVSIALASAKGALSFDPLAATLELGLPAHASEQQIKDRVQGWLQGEAKR CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH IFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKIRLNWRLIHFPMSIVDYVVAHEL HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHH SHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPAL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA