| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53718208
Identifier: 53718208
GI number: 53718208
Start: 623813
End: 624394
Strand: Reverse
Name: 53718208
Synonym: BPSL0568
Alternate gene names: NA
Gene position: 624394-623813 (Counterclockwise)
Preceding gene: 53718212
Following gene: 53718207
Centisome position: 15.32
GC content: 54.98
Gene sequence:
>582_bases GTGTTCACGAACCAAAGCAATAACGAGGTCAATGGCGGAGACCTCGTTGCCGGCGACAAGGTCGATAACAGCACGACTAC AGTCATCCACGTCACGTCGAATGGCTCGGCCAGCGAAGAGTTGTCAAAGCTCTACGAGAAGTTAAAGACTGACGGCATCG GTGACCCGTCGGGCGGAAAATTTTCCGAGAAGCTCGAGCACTACATGTCGTCGGCGACTGATGGGGACGTGCGAGGGCTG GAGAAAAAGTTGTGCGAAAGCGGAAGACAAGACATCTTGCATGCCGCTCTCAGCCTCAAAGAGCGCGCCGCCAAGTCCAT CATGAAGCATCAGACGTCGAGAACGGCGCAGCGAATCTTCACCATTGTCCTCACCGAGCTGCACGCGCGATTCACTCTCA CTGTCACGCCGGTTATCCAGCAGGGTCTCGACCGCGTCGCAGTCGACCAGTGCATCAATACGATTATTCAAGGGACTCAA AACGTGTTGGGCGAGAACGTTCTTGAGTTGGATGCCATTGACCTGCTCGCGTTGCTCTATTACCTGGGCGGCAACTGCCA TATCCGGTGGGATAAATGCTGA
Upstream 100 bases:
>100_bases GTTCGAACCGTTCGCACCGCGCTACCTTTGTTTCACAGAAGGGCAACATGGCAGGCGGCGATATCGTCGGCGGCGACAAG AGCACCCGCGAGTAGTATTC
Downstream 100 bases:
>100_bases TATACCACCCTGCCTATGACGCCTATCACTGTGTGTTCCGGATGCTGCTCATTGCCGAGCGAGTCTCTGGCATCGAGGTG GAGAAAGCGCGAATCTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MFTNQSNNEVNGGDLVAGDKVDNSTTTVIHVTSNGSASEELSKLYEKLKTDGIGDPSGGKFSEKLEHYMSSATDGDVRGL EKKLCESGRQDILHAALSLKERAAKSIMKHQTSRTAQRIFTIVLTELHARFTLTVTPVIQQGLDRVAVDQCINTIIQGTQ NVLGENVLELDAIDLLALLYYLGGNCHIRWDKC
Sequences:
>Translated_193_residues MFTNQSNNEVNGGDLVAGDKVDNSTTTVIHVTSNGSASEELSKLYEKLKTDGIGDPSGGKFSEKLEHYMSSATDGDVRGL EKKLCESGRQDILHAALSLKERAAKSIMKHQTSRTAQRIFTIVLTELHARFTLTVTPVIQQGLDRVAVDQCINTIIQGTQ NVLGENVLELDAIDLLALLYYLGGNCHIRWDKC >Mature_193_residues MFTNQSNNEVNGGDLVAGDKVDNSTTTVIHVTSNGSASEELSKLYEKLKTDGIGDPSGGKFSEKLEHYMSSATDGDVRGL EKKLCESGRQDILHAALSLKERAAKSIMKHQTSRTAQRIFTIVLTELHARFTLTVTPVIQQGLDRVAVDQCINTIIQGTQ NVLGENVLELDAIDLLALLYYLGGNCHIRWDKC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21135; Mature: 21135
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTNQSNNEVNGGDLVAGDKVDNSTTTVIHVTSNGSASEELSKLYEKLKTDGIGDPSGGK CCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC FSEKLEHYMSSATDGDVRGLEKKLCESGRQDILHAALSLKERAAKSIMKHQTSRTAQRIF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIVLTELHARFTLTVTPVIQQGLDRVAVDQCINTIIQGTQNVLGENVLELDAIDLLALLY HHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH YLGGNCHIRWDKC HHCCCCEEEECCC >Mature Secondary Structure MFTNQSNNEVNGGDLVAGDKVDNSTTTVIHVTSNGSASEELSKLYEKLKTDGIGDPSGGK CCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC FSEKLEHYMSSATDGDVRGLEKKLCESGRQDILHAALSLKERAAKSIMKHQTSRTAQRIF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIVLTELHARFTLTVTPVIQQGLDRVAVDQCINTIIQGTQNVLGENVLELDAIDLLALLY HHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH YLGGNCHIRWDKC HHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA