| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718128
Identifier: 53718128
GI number: 53718128
Start: 531547
End: 532113
Strand: Reverse
Name: 53718128
Synonym: BPSL0489
Alternate gene names: NA
Gene position: 532113-531547 (Counterclockwise)
Preceding gene: 53718129
Following gene: 53718127
Centisome position: 13.06
GC content: 73.72
Gene sequence:
>567_bases ATGACGCCCTTCGCCCTGCGCCGCTACCGGCTCGAACGCGCGCCCCGCACGCCGGTGCTCGTGCGCGCGTCGAGCTACGG CATCCCCGCCGCGACCGCCGACGATTACGCGCGCCTCGCCGCGTATCAGCCGGATTCGACGGCGCCCGTGCTGCTCGATC ACGCGCAGTACGTGCGCTTCATGTCGGAGCTCGTCGATGCGTTGTGGCAGGCGCTCGGTGCCGAGACGCGCGTGTTCGTC CGGTTCCGCATGCCGTACAACGGCGCGCTGCCCGCGAACCTGCTCGACCCGCGCGTGCTGATCGGCAGCGGCCTCGACAC GCAGATGGCGTTCTGGTCGCGCGTCGAGGCGCAGCCGGGCATCGGCATCGTCGACCGGATTCGCCGCGATCTCGATTACC CGGGCGACAACACGCTCGCGTTCGCGTGCGCGAGCGAGCGCCGGCTCGACGCGCTGGAAGCCGCGCTGCTGCGCGACTGG CCGCGCTACGCGATCCGCCTCGCGCGCGCCGCCGACGCCGCCGACGCCGCCGGCCAACCCGCGCGGCCGCCCGCCCGCTT CGCCTAA
Upstream 100 bases:
>100_bases CCGCGCGCGCGATCGTCGGCTCGCTCGCGCTCAACGGCTACTTCGCGATCGCCGAGATCGGCTACGACGCCGCCGCCCGC TTTCGCCTGGACGACACAGC
Downstream 100 bases:
>100_bases CCGACCATGGAAGCCACTATGCAACCGTACGAAGACGCCGCCCGCAGCCAGCGCTGGTCGATGCCCGTCGACGCGCTGAT GATGGGCGATTACGAATACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTPFALRRYRLERAPRTPVLVRASSYGIPAATADDYARLAAYQPDSTAPVLLDHAQYVRFMSELVDALWQALGAETRVFV RFRMPYNGALPANLLDPRVLIGSGLDTQMAFWSRVEAQPGIGIVDRIRRDLDYPGDNTLAFACASERRLDALEAALLRDW PRYAIRLARAADAADAAGQPARPPARFA
Sequences:
>Translated_188_residues MTPFALRRYRLERAPRTPVLVRASSYGIPAATADDYARLAAYQPDSTAPVLLDHAQYVRFMSELVDALWQALGAETRVFV RFRMPYNGALPANLLDPRVLIGSGLDTQMAFWSRVEAQPGIGIVDRIRRDLDYPGDNTLAFACASERRLDALEAALLRDW PRYAIRLARAADAADAAGQPARPPARFA >Mature_187_residues TPFALRRYRLERAPRTPVLVRASSYGIPAATADDYARLAAYQPDSTAPVLLDHAQYVRFMSELVDALWQALGAETRVFVR FRMPYNGALPANLLDPRVLIGSGLDTQMAFWSRVEAQPGIGIVDRIRRDLDYPGDNTLAFACASERRLDALEAALLRDWP RYAIRLARAADAADAAGQPARPPARFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20860; Mature: 20729
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFALRRYRLERAPRTPVLVRASSYGIPAATADDYARLAAYQPDSTAPVLLDHAQYVRF CCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH MSELVDALWQALGAETRVFVRFRMPYNGALPANLLDPRVLIGSGLDTQMAFWSRVEAQPG HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCC IGIVDRIRRDLDYPGDNTLAFACASERRLDALEAALLRDWPRYAIRLARAADAADAAGQP CCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCC ARPPARFA CCCCCCCC >Mature Secondary Structure TPFALRRYRLERAPRTPVLVRASSYGIPAATADDYARLAAYQPDSTAPVLLDHAQYVRF CCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH MSELVDALWQALGAETRVFVRFRMPYNGALPANLLDPRVLIGSGLDTQMAFWSRVEAQPG HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCC IGIVDRIRRDLDYPGDNTLAFACASERRLDALEAALLRDWPRYAIRLARAADAADAAGQP CCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCC ARPPARFA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA