| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718127
Identifier: 53718127
GI number: 53718127
Start: 530545
End: 531486
Strand: Reverse
Name: 53718127
Synonym: BPSL0488
Alternate gene names: NA
Gene position: 531486-530545 (Counterclockwise)
Preceding gene: 53718128
Following gene: 53718126
Centisome position: 13.04
GC content: 66.88
Gene sequence:
>942_bases ATGCCCGTCGACGCGCTGATGATGGGCGATTACGAATACCGCGAGACCGCGCTCACGAACCTGTACCACAAGGCGAAGGC CGCCCAGTGGGACGTCAACCGCGACATCGACTGGAACGTGACGCTCGACCCCGACAATCCGCTCGGCATGCCCGACGGAA TGCTGCTCGTGTTCGGCACCGATCTGTGGCACAAGCTCGGCGCGGCCGAGCGCGCGGAGATGCGCCATCACTGGCAGGGG TGGCTGCTGTCGCAGATCCTGCACGGCGAGCAGGCGGCGCTCATCTGCGCATCGAAGCTCGCGAGCGCCGAGCAGAGCCT GCCCGCGCGCCTGTGCGCGGCCGCGCAGATCATGGACGAGGCGCGCCACGTCGAGGCGTACGCGAAGCTCGTCAACGAGA AGATCAGCGTGCGCTACCCGATGAGCCGCTCGCTCGAAGGGCTGCTGAAGGACACCGTCACGTCGAGCGCGCTCGACATC ACGAACCTCGGCATGCAGGTGCTCGTCGAGGGAATCGCGCTGTCGACTTTCCAGACCGTCGTCGCGTTCAGCGCCGATCC GTTCGTCAAGGATCTGTTCGCGCGCATCCAGCGCGACGAGGCGCGCCATTTCGCGGTCGGCCGGCTCACGCTCGCCCGCG TGTATTCGGACATGACGTCCGCCGAGATGAAGGAGCGCGAGGAATTCGTGAGCGAGGGCGCATCGGTGCTGTACGAGCAC CTGTGCGCGGACGACATCTGGGAGCCGCTCGGCTATTCGAAGCAGGCCTGCGCGCAGATGGTGCGCGAATCCGAGGTGTC GCGCGCGCTGCGCCGCTCGATCTTCCGCCGCCTCGTGCCGACGATCCGCGAGATCGGCCTGCTCACGCCGCGCGTGCGCC GGACCTTCGAGCAGCTCGACGTGATCGATTACGAAGACATGCCGCTCGCCCTGGACATGTGA
Upstream 100 bases:
>100_bases CGCCGGCCAACCCGCGCGGCCGCCCGCCCGCTTCGCCTAACCGACCATGGAAGCCACTATGCAACCGTACGAAGACGCCG CCCGCAGCCAGCGCTGGTCG
Downstream 100 bases:
>100_bases CGCCATGCGCCCAGATCAAGCGAACCACTGGATCGGCATCGACGCCGCCGCGTACGAGCTGCCCGACGCGGCGATCGAGA TCGGCGCGTGGGCGGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MPVDALMMGDYEYRETALTNLYHKAKAAQWDVNRDIDWNVTLDPDNPLGMPDGMLLVFGTDLWHKLGAAERAEMRHHWQG WLLSQILHGEQAALICASKLASAEQSLPARLCAAAQIMDEARHVEAYAKLVNEKISVRYPMSRSLEGLLKDTVTSSALDI TNLGMQVLVEGIALSTFQTVVAFSADPFVKDLFARIQRDEARHFAVGRLTLARVYSDMTSAEMKEREEFVSEGASVLYEH LCADDIWEPLGYSKQACAQMVRESEVSRALRRSIFRRLVPTIREIGLLTPRVRRTFEQLDVIDYEDMPLALDM
Sequences:
>Translated_313_residues MPVDALMMGDYEYRETALTNLYHKAKAAQWDVNRDIDWNVTLDPDNPLGMPDGMLLVFGTDLWHKLGAAERAEMRHHWQG WLLSQILHGEQAALICASKLASAEQSLPARLCAAAQIMDEARHVEAYAKLVNEKISVRYPMSRSLEGLLKDTVTSSALDI TNLGMQVLVEGIALSTFQTVVAFSADPFVKDLFARIQRDEARHFAVGRLTLARVYSDMTSAEMKEREEFVSEGASVLYEH LCADDIWEPLGYSKQACAQMVRESEVSRALRRSIFRRLVPTIREIGLLTPRVRRTFEQLDVIDYEDMPLALDM >Mature_312_residues PVDALMMGDYEYRETALTNLYHKAKAAQWDVNRDIDWNVTLDPDNPLGMPDGMLLVFGTDLWHKLGAAERAEMRHHWQGW LLSQILHGEQAALICASKLASAEQSLPARLCAAAQIMDEARHVEAYAKLVNEKISVRYPMSRSLEGLLKDTVTSSALDIT NLGMQVLVEGIALSTFQTVVAFSADPFVKDLFARIQRDEARHFAVGRLTLARVYSDMTSAEMKEREEFVSEGASVLYEHL CADDIWEPLGYSKQACAQMVRESEVSRALRRSIFRRLVPTIREIGLLTPRVRRTFEQLDVIDYEDMPLALDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35422; Mature: 35291
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVDALMMGDYEYRETALTNLYHKAKAAQWDVNRDIDWNVTLDPDNPLGMPDGMLLVFGT CCCCHHEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEECH DLWHKLGAAERAEMRHHWQGWLLSQILHGEQAALICASKLASAEQSLPARLCAAAQIMDE HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARHVEAYAKLVNEKISVRYPMSRSLEGLLKDTVTSSALDITNLGMQVLVEGIALSTFQTV HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAFSADPFVKDLFARIQRDEARHFAVGRLTLARVYSDMTSAEMKEREEFVSEGASVLYEH HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCADDIWEPLGYSKQACAQMVRESEVSRALRRSIFRRLVPTIREIGLLTPRVRRTFEQLD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC VIDYEDMPLALDM CCCCCCCCEEECC >Mature Secondary Structure PVDALMMGDYEYRETALTNLYHKAKAAQWDVNRDIDWNVTLDPDNPLGMPDGMLLVFGT CCCHHEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEECH DLWHKLGAAERAEMRHHWQGWLLSQILHGEQAALICASKLASAEQSLPARLCAAAQIMDE HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARHVEAYAKLVNEKISVRYPMSRSLEGLLKDTVTSSALDITNLGMQVLVEGIALSTFQTV HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAFSADPFVKDLFARIQRDEARHFAVGRLTLARVYSDMTSAEMKEREEFVSEGASVLYEH HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCADDIWEPLGYSKQACAQMVRESEVSRALRRSIFRRLVPTIREIGLLTPRVRRTFEQLD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC VIDYEDMPLALDM CCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA