| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718008
Identifier: 53718008
GI number: 53718008
Start: 397561
End: 398844
Strand: Reverse
Name: 53718008
Synonym: BPSL0368
Alternate gene names: NA
Gene position: 398844-397561 (Counterclockwise)
Preceding gene: 53718009
Following gene: 53718007
Centisome position: 9.79
GC content: 71.26
Gene sequence:
>1284_bases GTGATGACGGGATGGATCGCGGCATGCGTGCTGTCGGCCGCTCAGGCCGATCCGCTGCCCTCCGATGCGCCGTCGGCGCC AGCCGCCGCCCCCTACGCGCCGCGCGTATCGCACGCGCCCCGCGCAGCCGGCGCGCTCGCGAACGCCGAGCGCTTCGACT ACGGCGATTCGGGCCTGCCGCCCGTCGCCGCGAATCTGAACGAAACGATCATCCGCATTCCGGTCGACGCCGCCGGCGCG ATCACGCTCGAGGCGACCGTATACAAGCCGGATGGCCCGGGCCCCTTCCCGCTCGTGGTCTTCAACCACGGCAAGAATCC CGGCGATCTGCGCGCGCAGCCGCGCAGCCGGCCGCTGTCGTTCGCGCGCGAGTTCGTGCGGCGCGGCTATGCGGTGGTCG CGCCGAACCGCGAGGGCTTCGCCGGCTCGGGCGGCACGTACATCCAGGAAGGCTGCGACGTCGAGCGCAACGGCGTCGCG CAGGCGCGCGACGTCGCCGCGACGATCGGCTACATGTCGAAGCTGTCCTACGTCGATGCGAGGCACGTCGTCGTCGCCGG CACGTCGCACGGCGGGCTCGTGTCGCTCGCGTACGGCACCGAGGCCGCGCGCGGCGTGCGCGGAATCATCAACTTCTCGG GCGGGCTGCGTCAGGATCTCTGCGAAGGCTGGCAGAAGAACCTCGTCGACGCGTTCGATACGTACGGCTCGCGCACGCAC GTGCCGTCGCTCTGGCTGTACGGCGAGAACGATTCGGTATGGTCGCCCGCGCTCGTCGCGCAACTGCGCGACGCGTACAT GTCGCACGGCGCGAGCACGCTCTTCGTCGATTTCGGCCGCTACAAGGACGACGCGCACCGGATCATCGTCGATCGCGACG GCGTGCCGATCTGGTGGCCGCCCGTCGCGTCGTTCCTCGCGCAACTGAGCCTGCCCACCTCGGTCCGCTATGCGGTCGCG AATCCGCACGAGCCGAAGGCGAGCGGCTATGCGGCGATCGAATCGGTCGATGCGGTGCCGTTCATCGACGACGCCGGCCG CGCCGCGTATCGCCGCTTCCTCGCGCAGCATCCGAGCCGCGCGTTCGCGGTGTCGAGCGAGGGCGCATGGTCGTGGGCCG AAGGCGGCGACGATCCGATGGCGCTCGCGCTCGAAGGCTGCCGCAAGCAGGGCGCGGGGGCGTGCCAGCTGTATGCGGTC GACGAGCGCGTCGTGTGGCGCGACGCGGGCACGCAGACGGCGGACGAATCGACGAGCGCGGCGCACGCGCTCGCGAGCCG CTGA
Upstream 100 bases:
>100_bases CCGGGTAATTCCGGCGTTGCACAATCGAAATTTGTCAGGCTAGGATGGCCCACGTTTGGTGCAATTCGCGTGGGTGGGCT CGGGCATGGCGTTCGGCAAG
Downstream 100 bases:
>100_bases CCGCCCCGCGAACCTCGCATCCCGCCCGCACATCCCCGGCGATGCCTCGCCCGTCCCGATTCGGCCCGCCCCGTCCGGCC GATCGCGCATGAGCGCCCGC
Product: peptidase
Products: NA
Alternate protein names: Signal Peptide Protein; Dipeptidyl Aminopeptidase/Acylaminoacyl-Peptidase; Dienelactone Hydrolase And Related S-Like Protein; Dienelactone Hydrolase-Like; Acylamino-Acid-Releasing; Dipeptidyl; Dienelactone Hydrolase And Related S Protein; Subfamily S9C Unassigned Peptidase; Dienelactone Hydrolase-Like Protein; Lipoprotein
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MMTGWIAACVLSAAQADPLPSDAPSAPAAAPYAPRVSHAPRAAGALANAERFDYGDSGLPPVAANLNETIIRIPVDAAGA ITLEATVYKPDGPGPFPLVVFNHGKNPGDLRAQPRSRPLSFAREFVRRGYAVVAPNREGFAGSGGTYIQEGCDVERNGVA QARDVAATIGYMSKLSYVDARHVVVAGTSHGGLVSLAYGTEAARGVRGIINFSGGLRQDLCEGWQKNLVDAFDTYGSRTH VPSLWLYGENDSVWSPALVAQLRDAYMSHGASTLFVDFGRYKDDAHRIIVDRDGVPIWWPPVASFLAQLSLPTSVRYAVA NPHEPKASGYAAIESVDAVPFIDDAGRAAYRRFLAQHPSRAFAVSSEGAWSWAEGGDDPMALALEGCRKQGAGACQLYAV DERVVWRDAGTQTADESTSAAHALASR
Sequences:
>Translated_427_residues MMTGWIAACVLSAAQADPLPSDAPSAPAAAPYAPRVSHAPRAAGALANAERFDYGDSGLPPVAANLNETIIRIPVDAAGA ITLEATVYKPDGPGPFPLVVFNHGKNPGDLRAQPRSRPLSFAREFVRRGYAVVAPNREGFAGSGGTYIQEGCDVERNGVA QARDVAATIGYMSKLSYVDARHVVVAGTSHGGLVSLAYGTEAARGVRGIINFSGGLRQDLCEGWQKNLVDAFDTYGSRTH VPSLWLYGENDSVWSPALVAQLRDAYMSHGASTLFVDFGRYKDDAHRIIVDRDGVPIWWPPVASFLAQLSLPTSVRYAVA NPHEPKASGYAAIESVDAVPFIDDAGRAAYRRFLAQHPSRAFAVSSEGAWSWAEGGDDPMALALEGCRKQGAGACQLYAV DERVVWRDAGTQTADESTSAAHALASR >Mature_427_residues MMTGWIAACVLSAAQADPLPSDAPSAPAAAPYAPRVSHAPRAAGALANAERFDYGDSGLPPVAANLNETIIRIPVDAAGA ITLEATVYKPDGPGPFPLVVFNHGKNPGDLRAQPRSRPLSFAREFVRRGYAVVAPNREGFAGSGGTYIQEGCDVERNGVA QARDVAATIGYMSKLSYVDARHVVVAGTSHGGLVSLAYGTEAARGVRGIINFSGGLRQDLCEGWQKNLVDAFDTYGSRTH VPSLWLYGENDSVWSPALVAQLRDAYMSHGASTLFVDFGRYKDDAHRIIVDRDGVPIWWPPVASFLAQLSLPTSVRYAVA NPHEPKASGYAAIESVDAVPFIDDAGRAAYRRFLAQHPSRAFAVSSEGAWSWAEGGDDPMALALEGCRKQGAGACQLYAV DERVVWRDAGTQTADESTSAAHALASR
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45370; Mature: 45370
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTGWIAACVLSAAQADPLPSDAPSAPAAAPYAPRVSHAPRAAGALANAERFDYGDSGLP CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCCCCCCCC PVAANLNETIIRIPVDAAGAITLEATVYKPDGPGPFPLVVFNHGKNPGDLRAQPRSRPLS CCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHH FAREFVRRGYAVVAPNREGFAGSGGTYIQEGCDVERNGVAQARDVAATIGYMSKLSYVDA HHHHHHHCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC RHVVVAGTSHGGLVSLAYGTEAARGVRGIINFSGGLRQDLCEGWQKNLVDAFDTYGSRTH CEEEEEECCCCCEEEEECCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC VPSLWLYGENDSVWSPALVAQLRDAYMSHGASTLFVDFGRYKDDAHRIIVDRDGVPIWWP CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCEECH PVASFLAQLSLPTSVRYAVANPHEPKASGYAAIESVDAVPFIDDAGRAAYRRFLAQHPSR HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC AFAVSSEGAWSWAEGGDDPMALALEGCRKQGAGACQLYAVDERVVWRDAGTQTADESTSA EEEECCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCCCCCHHH AHALASR HHHHHCC >Mature Secondary Structure MMTGWIAACVLSAAQADPLPSDAPSAPAAAPYAPRVSHAPRAAGALANAERFDYGDSGLP CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCCCCCCCC PVAANLNETIIRIPVDAAGAITLEATVYKPDGPGPFPLVVFNHGKNPGDLRAQPRSRPLS CCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHH FAREFVRRGYAVVAPNREGFAGSGGTYIQEGCDVERNGVAQARDVAATIGYMSKLSYVDA HHHHHHHCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC RHVVVAGTSHGGLVSLAYGTEAARGVRGIINFSGGLRQDLCEGWQKNLVDAFDTYGSRTH CEEEEEECCCCCEEEEECCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC VPSLWLYGENDSVWSPALVAQLRDAYMSHGASTLFVDFGRYKDDAHRIIVDRDGVPIWWP CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCEECH PVASFLAQLSLPTSVRYAVANPHEPKASGYAAIESVDAVPFIDDAGRAAYRRFLAQHPSR HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC AFAVSSEGAWSWAEGGDDPMALALEGCRKQGAGACQLYAVDERVVWRDAGTQTADESTSA EEEECCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCCCCCHHH AHALASR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA