Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53718008

Identifier: 53718008

GI number: 53718008

Start: 397561

End: 398844

Strand: Reverse

Name: 53718008

Synonym: BPSL0368

Alternate gene names: NA

Gene position: 398844-397561 (Counterclockwise)

Preceding gene: 53718009

Following gene: 53718007

Centisome position: 9.79

GC content: 71.26

Gene sequence:

>1284_bases
GTGATGACGGGATGGATCGCGGCATGCGTGCTGTCGGCCGCTCAGGCCGATCCGCTGCCCTCCGATGCGCCGTCGGCGCC
AGCCGCCGCCCCCTACGCGCCGCGCGTATCGCACGCGCCCCGCGCAGCCGGCGCGCTCGCGAACGCCGAGCGCTTCGACT
ACGGCGATTCGGGCCTGCCGCCCGTCGCCGCGAATCTGAACGAAACGATCATCCGCATTCCGGTCGACGCCGCCGGCGCG
ATCACGCTCGAGGCGACCGTATACAAGCCGGATGGCCCGGGCCCCTTCCCGCTCGTGGTCTTCAACCACGGCAAGAATCC
CGGCGATCTGCGCGCGCAGCCGCGCAGCCGGCCGCTGTCGTTCGCGCGCGAGTTCGTGCGGCGCGGCTATGCGGTGGTCG
CGCCGAACCGCGAGGGCTTCGCCGGCTCGGGCGGCACGTACATCCAGGAAGGCTGCGACGTCGAGCGCAACGGCGTCGCG
CAGGCGCGCGACGTCGCCGCGACGATCGGCTACATGTCGAAGCTGTCCTACGTCGATGCGAGGCACGTCGTCGTCGCCGG
CACGTCGCACGGCGGGCTCGTGTCGCTCGCGTACGGCACCGAGGCCGCGCGCGGCGTGCGCGGAATCATCAACTTCTCGG
GCGGGCTGCGTCAGGATCTCTGCGAAGGCTGGCAGAAGAACCTCGTCGACGCGTTCGATACGTACGGCTCGCGCACGCAC
GTGCCGTCGCTCTGGCTGTACGGCGAGAACGATTCGGTATGGTCGCCCGCGCTCGTCGCGCAACTGCGCGACGCGTACAT
GTCGCACGGCGCGAGCACGCTCTTCGTCGATTTCGGCCGCTACAAGGACGACGCGCACCGGATCATCGTCGATCGCGACG
GCGTGCCGATCTGGTGGCCGCCCGTCGCGTCGTTCCTCGCGCAACTGAGCCTGCCCACCTCGGTCCGCTATGCGGTCGCG
AATCCGCACGAGCCGAAGGCGAGCGGCTATGCGGCGATCGAATCGGTCGATGCGGTGCCGTTCATCGACGACGCCGGCCG
CGCCGCGTATCGCCGCTTCCTCGCGCAGCATCCGAGCCGCGCGTTCGCGGTGTCGAGCGAGGGCGCATGGTCGTGGGCCG
AAGGCGGCGACGATCCGATGGCGCTCGCGCTCGAAGGCTGCCGCAAGCAGGGCGCGGGGGCGTGCCAGCTGTATGCGGTC
GACGAGCGCGTCGTGTGGCGCGACGCGGGCACGCAGACGGCGGACGAATCGACGAGCGCGGCGCACGCGCTCGCGAGCCG
CTGA

Upstream 100 bases:

>100_bases
CCGGGTAATTCCGGCGTTGCACAATCGAAATTTGTCAGGCTAGGATGGCCCACGTTTGGTGCAATTCGCGTGGGTGGGCT
CGGGCATGGCGTTCGGCAAG

Downstream 100 bases:

>100_bases
CCGCCCCGCGAACCTCGCATCCCGCCCGCACATCCCCGGCGATGCCTCGCCCGTCCCGATTCGGCCCGCCCCGTCCGGCC
GATCGCGCATGAGCGCCCGC

Product: peptidase

Products: NA

Alternate protein names: Signal Peptide Protein; Dipeptidyl Aminopeptidase/Acylaminoacyl-Peptidase; Dienelactone Hydrolase And Related S-Like Protein; Dienelactone Hydrolase-Like; Acylamino-Acid-Releasing; Dipeptidyl; Dienelactone Hydrolase And Related S Protein; Subfamily S9C Unassigned Peptidase; Dienelactone Hydrolase-Like Protein; Lipoprotein

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MMTGWIAACVLSAAQADPLPSDAPSAPAAAPYAPRVSHAPRAAGALANAERFDYGDSGLPPVAANLNETIIRIPVDAAGA
ITLEATVYKPDGPGPFPLVVFNHGKNPGDLRAQPRSRPLSFAREFVRRGYAVVAPNREGFAGSGGTYIQEGCDVERNGVA
QARDVAATIGYMSKLSYVDARHVVVAGTSHGGLVSLAYGTEAARGVRGIINFSGGLRQDLCEGWQKNLVDAFDTYGSRTH
VPSLWLYGENDSVWSPALVAQLRDAYMSHGASTLFVDFGRYKDDAHRIIVDRDGVPIWWPPVASFLAQLSLPTSVRYAVA
NPHEPKASGYAAIESVDAVPFIDDAGRAAYRRFLAQHPSRAFAVSSEGAWSWAEGGDDPMALALEGCRKQGAGACQLYAV
DERVVWRDAGTQTADESTSAAHALASR

Sequences:

>Translated_427_residues
MMTGWIAACVLSAAQADPLPSDAPSAPAAAPYAPRVSHAPRAAGALANAERFDYGDSGLPPVAANLNETIIRIPVDAAGA
ITLEATVYKPDGPGPFPLVVFNHGKNPGDLRAQPRSRPLSFAREFVRRGYAVVAPNREGFAGSGGTYIQEGCDVERNGVA
QARDVAATIGYMSKLSYVDARHVVVAGTSHGGLVSLAYGTEAARGVRGIINFSGGLRQDLCEGWQKNLVDAFDTYGSRTH
VPSLWLYGENDSVWSPALVAQLRDAYMSHGASTLFVDFGRYKDDAHRIIVDRDGVPIWWPPVASFLAQLSLPTSVRYAVA
NPHEPKASGYAAIESVDAVPFIDDAGRAAYRRFLAQHPSRAFAVSSEGAWSWAEGGDDPMALALEGCRKQGAGACQLYAV
DERVVWRDAGTQTADESTSAAHALASR
>Mature_427_residues
MMTGWIAACVLSAAQADPLPSDAPSAPAAAPYAPRVSHAPRAAGALANAERFDYGDSGLPPVAANLNETIIRIPVDAAGA
ITLEATVYKPDGPGPFPLVVFNHGKNPGDLRAQPRSRPLSFAREFVRRGYAVVAPNREGFAGSGGTYIQEGCDVERNGVA
QARDVAATIGYMSKLSYVDARHVVVAGTSHGGLVSLAYGTEAARGVRGIINFSGGLRQDLCEGWQKNLVDAFDTYGSRTH
VPSLWLYGENDSVWSPALVAQLRDAYMSHGASTLFVDFGRYKDDAHRIIVDRDGVPIWWPPVASFLAQLSLPTSVRYAVA
NPHEPKASGYAAIESVDAVPFIDDAGRAAYRRFLAQHPSRAFAVSSEGAWSWAEGGDDPMALALEGCRKQGAGACQLYAV
DERVVWRDAGTQTADESTSAAHALASR

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45370; Mature: 45370

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTGWIAACVLSAAQADPLPSDAPSAPAAAPYAPRVSHAPRAAGALANAERFDYGDSGLP
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCCCCCCCC
PVAANLNETIIRIPVDAAGAITLEATVYKPDGPGPFPLVVFNHGKNPGDLRAQPRSRPLS
CCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHH
FAREFVRRGYAVVAPNREGFAGSGGTYIQEGCDVERNGVAQARDVAATIGYMSKLSYVDA
HHHHHHHCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
RHVVVAGTSHGGLVSLAYGTEAARGVRGIINFSGGLRQDLCEGWQKNLVDAFDTYGSRTH
CEEEEEECCCCCEEEEECCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC
VPSLWLYGENDSVWSPALVAQLRDAYMSHGASTLFVDFGRYKDDAHRIIVDRDGVPIWWP
CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCEECH
PVASFLAQLSLPTSVRYAVANPHEPKASGYAAIESVDAVPFIDDAGRAAYRRFLAQHPSR
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
AFAVSSEGAWSWAEGGDDPMALALEGCRKQGAGACQLYAVDERVVWRDAGTQTADESTSA
EEEECCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCCCCCHHH
AHALASR
HHHHHCC
>Mature Secondary Structure
MMTGWIAACVLSAAQADPLPSDAPSAPAAAPYAPRVSHAPRAAGALANAERFDYGDSGLP
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCCCCCCCC
PVAANLNETIIRIPVDAAGAITLEATVYKPDGPGPFPLVVFNHGKNPGDLRAQPRSRPLS
CCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHH
FAREFVRRGYAVVAPNREGFAGSGGTYIQEGCDVERNGVAQARDVAATIGYMSKLSYVDA
HHHHHHHCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
RHVVVAGTSHGGLVSLAYGTEAARGVRGIINFSGGLRQDLCEGWQKNLVDAFDTYGSRTH
CEEEEEECCCCCEEEEECCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC
VPSLWLYGENDSVWSPALVAQLRDAYMSHGASTLFVDFGRYKDDAHRIIVDRDGVPIWWP
CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCEECH
PVASFLAQLSLPTSVRYAVANPHEPKASGYAAIESVDAVPFIDDAGRAAYRRFLAQHPSR
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
AFAVSSEGAWSWAEGGDDPMALALEGCRKQGAGACQLYAVDERVVWRDAGTQTADESTSA
EEEECCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCCCCCHHH
AHALASR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA