Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53717989

Identifier: 53717989

GI number: 53717989

Start: 371477

End: 372250

Strand: Reverse

Name: 53717989

Synonym: BPSL0348

Alternate gene names: NA

Gene position: 372250-371477 (Counterclockwise)

Preceding gene: 53717997

Following gene: 53717988

Centisome position: 9.14

GC content: 59.04

Gene sequence:

>774_bases
GTGAGCTTCGGTTATGAGGGCCTTCGTCGTCCAATACTGTCGCGGTCGACGCGCCCCCGAGCCACAACCGCGGTTCGAGC
GCAACATCCGTCTCGTCAGCAGTCCACCCTACCCATACCGGTAGGTGTGCCATCGGCGCGGACGGCGCATCATGCCTATG
AAGCGTCCATTGCATACATGTCCCGCCATTTCACGAAGGCAATTTTCATGGAACCCTCCGCCACAACGACGCCGCCCCGA
CATCGGGTCGACCTGCTGGTCGTCATCGATTCCGATTATGTGAAGGAAAACTATCCCGACGGCAGCAGGGTGCCGGGCAC
TCCGACTCCCGTCGACAGCCGTGCGCTATTCGTCATTTGCGCAGGATCGGATATCGGCGATATTCAGTCAGGCGAAGCGA
TATGCACCGCCGCTGTCGGCGATGTCGTCTCCGTAACCTGCACGACGATTCAGGACAATTCGAGCGACGCCGGAATCCTG
TACGACATATGGCAGGCGGTTAATGGCCAGGTATTCACCCCATTTAAACAGAACTTCTCTGAACTGACGGGCGCAGTGCA
ACCCGATCCCGAATCCGAAAGCCGAGACGGACTGCCGCCGCTTCGCAAGGAAGCGCATGTATCGAACTTCACCGCTGATG
TGAAGTCACTCGGAAATGCGCAGCTCGGGCTTGCATTCGGGATTTACACGTTGGCGCGCGACGGACAAAGGCAGGACCTG
CTCGGCTATTACCTGAGCCCGGTTGTCTTGCAGGTTCGCGGGCAACGGCCCTGA

Upstream 100 bases:

>100_bases
ACACGTGGTCTACGTGTCACGGGCCACTCTCCTCTCTTTTGGAGGATCCCACACCTACCAGAGTCGGTAGCCGGCGGCCC
AGCCTTCACCCCTTGCTCTC

Downstream 100 bases:

>100_bases
CCGCGTTATCTCGCGCCGTGGCTCACTGGCTCTTGCCCATCGGGACGACCCGAACGATACGGCACCACCCTCGGCACACC
GATCTTTGATTGGTTTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSFGYEGLRRPILSRSTRPRATTAVRAQHPSRQQSTLPIPVGVPSARTAHHAYEASIAYMSRHFTKAIFMEPSATTTPPR
HRVDLLVVIDSDYVKENYPDGSRVPGTPTPVDSRALFVICAGSDIGDIQSGEAICTAAVGDVVSVTCTTIQDNSSDAGIL
YDIWQAVNGQVFTPFKQNFSELTGAVQPDPESESRDGLPPLRKEAHVSNFTADVKSLGNAQLGLAFGIYTLARDGQRQDL
LGYYLSPVVLQVRGQRP

Sequences:

>Translated_257_residues
MSFGYEGLRRPILSRSTRPRATTAVRAQHPSRQQSTLPIPVGVPSARTAHHAYEASIAYMSRHFTKAIFMEPSATTTPPR
HRVDLLVVIDSDYVKENYPDGSRVPGTPTPVDSRALFVICAGSDIGDIQSGEAICTAAVGDVVSVTCTTIQDNSSDAGIL
YDIWQAVNGQVFTPFKQNFSELTGAVQPDPESESRDGLPPLRKEAHVSNFTADVKSLGNAQLGLAFGIYTLARDGQRQDL
LGYYLSPVVLQVRGQRP
>Mature_256_residues
SFGYEGLRRPILSRSTRPRATTAVRAQHPSRQQSTLPIPVGVPSARTAHHAYEASIAYMSRHFTKAIFMEPSATTTPPRH
RVDLLVVIDSDYVKENYPDGSRVPGTPTPVDSRALFVICAGSDIGDIQSGEAICTAAVGDVVSVTCTTIQDNSSDAGILY
DIWQAVNGQVFTPFKQNFSELTGAVQPDPESESRDGLPPLRKEAHVSNFTADVKSLGNAQLGLAFGIYTLARDGQRQDLL
GYYLSPVVLQVRGQRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27888; Mature: 27756

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFGYEGLRRPILSRSTRPRATTAVRAQHPSRQQSTLPIPVGVPSARTAHHAYEASIAYM
CCCCHHHHHHHHHCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
SRHFTKAIFMEPSATTTPPRHRVDLLVVIDSDYVKENYPDGSRVPGTPTPVDSRALFVIC
HHHHHHEEEECCCCCCCCCCCCEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCEEEEEE
AGSDIGDIQSGEAICTAAVGDVVSVTCTTIQDNSSDAGILYDIWQAVNGQVFTPFKQNFS
CCCCCCCCCCCCEEEEEHHCCEEEEEEEEEECCCCCCCHHHHHHHHHCCCEECHHHHHHH
ELTGAVQPDPESESRDGLPPLRKEAHVSNFTADVKSLGNAQLGLAFGIYTLARDGQRQDL
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHH
LGYYLSPVVLQVRGQRP
HHHHHCCEEEEECCCCC
>Mature Secondary Structure 
SFGYEGLRRPILSRSTRPRATTAVRAQHPSRQQSTLPIPVGVPSARTAHHAYEASIAYM
CCCHHHHHHHHHCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
SRHFTKAIFMEPSATTTPPRHRVDLLVVIDSDYVKENYPDGSRVPGTPTPVDSRALFVIC
HHHHHHEEEECCCCCCCCCCCCEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCEEEEEE
AGSDIGDIQSGEAICTAAVGDVVSVTCTTIQDNSSDAGILYDIWQAVNGQVFTPFKQNFS
CCCCCCCCCCCCEEEEEHHCCEEEEEEEEEECCCCCCCHHHHHHHHHCCCEECHHHHHHH
ELTGAVQPDPESESRDGLPPLRKEAHVSNFTADVKSLGNAQLGLAFGIYTLARDGQRQDL
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHH
LGYYLSPVVLQVRGQRP
HHHHHCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA