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The map label for this gene is trg [H]

Identifier: 53717964

GI number: 53717964

Start: 343678

End: 345237

Strand: Reverse

Name: trg [H]

Synonym: BPSL0323

Alternate gene names: 53717964

Gene position: 345237-343678 (Counterclockwise)

Preceding gene: 53717965

Following gene: 53717963

Centisome position: 8.47

GC content: 73.59

Gene sequence:

>1560_bases
ATGAACACCACCCGCCTCACCGTCAAGACCCGTCTGCGCATCCTCGTCGCGATCGTCGTCCTCGTGCTCGCCGCCGCGGG
CGGCATCGGCCTCGCGGGGGTCGCGCGCGTCGGCGACGCGCTCACGCACGTCTTCGAAGACCGCGCGAAAACGCTGCAGC
GAATCTCGTCGGTCGACGAACTCGTCACGCAGGCGCGCTACGCGGTCGGCGACGCCGTGCTCGATCCGTCCGCCGCGAAA
ACCGAAGCGGTCGCCGCGGCGGCGGCGCGCGACGTCGCCGCGATCGATCGCCTGCTCGCCGACTTTCGCGCGACGCCGCG
CGCGGGCGCCGAGCGCGAGCAGGCGGAGCGCCTCGCCGCCGACTGGGCGACGTTGCGCGACAAGGGCATCCGGCCCGCCG
TCGATCTGCTGAAGGCAAACAACCTGTCCGAAGCGCAATGGGTCGTCACGCAAACGCTCGATCCCGTTGCGCAACGCGTG
AAGGGCGAAGCCGCGCAGTTGCGCCAGAACCAGCTCGAGGCCGCGCAACGCGCGTACGACCGCGCGCGCGGCGTCGCGCG
GCTCGTCCAGTGGGCGGTCGCGGGCTGCGTGCTCGCGGGCGTCGCCGCCGTCGCGATCCTGTGCGCGGCGATGGCGCGCG
CGCTCGCGCGGCAGTTGGGCGGCGAGCCGGACTACGCGGCGAGCGTCGCGAACGAGATCGCGTCCGGCAATCTCGCGCTC
GACCTGCACGCGGCCGACGCCGCAGCCGGCAGCGTGCTGCACGCGATGCACGCGATGCGCGCGCGCCTCGCGGCGACGAT
CGGCACGCTGCAGCGCGCGGCCGACGCGATCGCGCACGCGACGTCCGACATCGCGCACGGCAATCACGACTTGTCGCGCC
GCACCGACGAACACGCGGCCGGCCTGCAGCAGACGGCGAGCAGCATGGAGCAGCTCGCGGCGACGGTGCGCACGAACGCC
GACCACGCGCGGCAGGCGAGCGCGCTCGCGCTCGCCGCATCGACGCAGGCCGAACAGGGCGACGCCGCCGCGCGCGACGC
GATCGCGCGGATGGAGGCGCTCTCGGTACGCTCGCAGCAGATCCGCAGCATCTCGTCGACGATCGAGGGCATCGCCTTCC
AGACCAATCTGCTCGCGCTGAACGCCGCCGTCGAGGCGGCGCGCGCCGGGCAGGCGGGACGCGGTTTCGCGGTCGTCGCG
CAGGAGGTGCGCGGCCTCGCGCACAGCAGCGCGCAGGCCGCGAAGGAAATCTCGGCGCTGATCGCCGACGTGACGGGCGA
AGTCGAGCTCGGCGCGGACACGGTGAAGGCCGCCGGCAGCACGATCGTCGGCATGCTCGCGTCGGTGCGGCAGGTCGCGA
CGCTCGTCGACGAAATCTCGCACGCGTCCGACGAGCAGCGTTCCGGCATCGACCAGGTAAGCCGCGCGGTCGCGCAGATG
GACGAGATGACGCAGCACAACGCGCTGCTCGTGCAAAAGGCGGCGGGCGCCGCGGGCGCGCTCGCCGACGAGGCGGCCGC
GCTGCGCGAGGCCGCCGCGATCTTCCGGGTCGTCGCGTGA

Upstream 100 bases:

>100_bases
GAAAAATTCATTCAACCACGGTTCCGCAGCGCCGTTAAGCCGGCTTCTCGTCACGGCCCAACGCGTCACGAGCGCGGCGC
GCCGCCTCCGGAATCCCTCG

Downstream 100 bases:

>100_bases
ACGCCGTTCACGTCGGCACGCCGTCTTGTTTAGTATTTTTAGTAAACGATTATGATCTCATTTACCGTTTATAAATAAGC
GCTTATAAGCAGCACCCGCC

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MNTTRLTVKTRLRILVAIVVLVLAAAGGIGLAGVARVGDALTHVFEDRAKTLQRISSVDELVTQARYAVGDAVLDPSAAK
TEAVAAAAARDVAAIDRLLADFRATPRAGAEREQAERLAADWATLRDKGIRPAVDLLKANNLSEAQWVVTQTLDPVAQRV
KGEAAQLRQNQLEAAQRAYDRARGVARLVQWAVAGCVLAGVAAVAILCAAMARALARQLGGEPDYAASVANEIASGNLAL
DLHAADAAAGSVLHAMHAMRARLAATIGTLQRAADAIAHATSDIAHGNHDLSRRTDEHAAGLQQTASSMEQLAATVRTNA
DHARQASALALAASTQAEQGDAAARDAIARMEALSVRSQQIRSISSTIEGIAFQTNLLALNAAVEAARAGQAGRGFAVVA
QEVRGLAHSSAQAAKEISALIADVTGEVELGADTVKAAGSTIVGMLASVRQVATLVDEISHASDEQRSGIDQVSRAVAQM
DEMTQHNALLVQKAAGAAGALADEAAALREAAAIFRVVA

Sequences:

>Translated_519_residues
MNTTRLTVKTRLRILVAIVVLVLAAAGGIGLAGVARVGDALTHVFEDRAKTLQRISSVDELVTQARYAVGDAVLDPSAAK
TEAVAAAAARDVAAIDRLLADFRATPRAGAEREQAERLAADWATLRDKGIRPAVDLLKANNLSEAQWVVTQTLDPVAQRV
KGEAAQLRQNQLEAAQRAYDRARGVARLVQWAVAGCVLAGVAAVAILCAAMARALARQLGGEPDYAASVANEIASGNLAL
DLHAADAAAGSVLHAMHAMRARLAATIGTLQRAADAIAHATSDIAHGNHDLSRRTDEHAAGLQQTASSMEQLAATVRTNA
DHARQASALALAASTQAEQGDAAARDAIARMEALSVRSQQIRSISSTIEGIAFQTNLLALNAAVEAARAGQAGRGFAVVA
QEVRGLAHSSAQAAKEISALIADVTGEVELGADTVKAAGSTIVGMLASVRQVATLVDEISHASDEQRSGIDQVSRAVAQM
DEMTQHNALLVQKAAGAAGALADEAAALREAAAIFRVVA
>Mature_519_residues
MNTTRLTVKTRLRILVAIVVLVLAAAGGIGLAGVARVGDALTHVFEDRAKTLQRISSVDELVTQARYAVGDAVLDPSAAK
TEAVAAAAARDVAAIDRLLADFRATPRAGAEREQAERLAADWATLRDKGIRPAVDLLKANNLSEAQWVVTQTLDPVAQRV
KGEAAQLRQNQLEAAQRAYDRARGVARLVQWAVAGCVLAGVAAVAILCAAMARALARQLGGEPDYAASVANEIASGNLAL
DLHAADAAAGSVLHAMHAMRARLAATIGTLQRAADAIAHATSDIAHGNHDLSRRTDEHAAGLQQTASSMEQLAATVRTNA
DHARQASALALAASTQAEQGDAAARDAIARMEALSVRSQQIRSISSTIEGIAFQTNLLALNAAVEAARAGQAGRGFAVVA
QEVRGLAHSSAQAAKEISALIADVTGEVELGADTVKAAGSTIVGMLASVRQVATLVDEISHASDEQRSGIDQVSRAVAQM
DEMTQHNALLVQKAAGAAGALADEAAALREAAAIFRVVA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=398, Percent_Identity=41.4572864321608, Blast_Score=245, Evalue=5e-66,
Organism=Escherichia coli, GI2367378, Length=286, Percent_Identity=50.3496503496504, Blast_Score=235, Evalue=6e-63,
Organism=Escherichia coli, GI1788195, Length=289, Percent_Identity=49.8269896193772, Blast_Score=221, Evalue=6e-59,
Organism=Escherichia coli, GI1788194, Length=367, Percent_Identity=42.2343324250681, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI1789453, Length=344, Percent_Identity=35.1744186046512, Blast_Score=162, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 53642; Mature: 53642

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTRLTVKTRLRILVAIVVLVLAAAGGIGLAGVARVGDALTHVFEDRAKTLQRISSVDE
CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVTQARYAVGDAVLDPSAAKTEAVAAAAARDVAAIDRLLADFRATPRAGAEREQAERLAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DWATLRDKGIRPAVDLLKANNLSEAQWVVTQTLDPVAQRVKGEAAQLRQNQLEAAQRAYD
HHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RARGVARLVQWAVAGCVLAGVAAVAILCAAMARALARQLGGEPDYAASVANEIASGNLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEE
DLHAADAAAGSVLHAMHAMRARLAATIGTLQRAADAIAHATSDIAHGNHDLSRRTDEHAA
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHH
GLQQTASSMEQLAATVRTNADHARQASALALAASTQAEQGDAAARDAIARMEALSVRSQQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IRSISSTIEGIAFQTNLLALNAAVEAARAGQAGRGFAVVAQEVRGLAHSSAQAAKEISAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IADVTGEVELGADTVKAAGSTIVGMLASVRQVATLVDEISHASDEQRSGIDQVSRAVAQM
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHH
DEMTQHNALLVQKAAGAAGALADEAAALREAAAIFRVVA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTTRLTVKTRLRILVAIVVLVLAAAGGIGLAGVARVGDALTHVFEDRAKTLQRISSVDE
CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVTQARYAVGDAVLDPSAAKTEAVAAAAARDVAAIDRLLADFRATPRAGAEREQAERLAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DWATLRDKGIRPAVDLLKANNLSEAQWVVTQTLDPVAQRVKGEAAQLRQNQLEAAQRAYD
HHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RARGVARLVQWAVAGCVLAGVAAVAILCAAMARALARQLGGEPDYAASVANEIASGNLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEE
DLHAADAAAGSVLHAMHAMRARLAATIGTLQRAADAIAHATSDIAHGNHDLSRRTDEHAA
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHH
GLQQTASSMEQLAATVRTNADHARQASALALAASTQAEQGDAAARDAIARMEALSVRSQQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IRSISSTIEGIAFQTNLLALNAAVEAARAGQAGRGFAVVAQEVRGLAHSSAQAAKEISAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IADVTGEVELGADTVKAAGSTIVGMLASVRQVATLVDEISHASDEQRSGIDQVSRAVAQM
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHH
DEMTQHNALLVQKAAGAAGALADEAAALREAAAIFRVVA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]