| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53717956
Identifier: 53717956
GI number: 53717956
Start: 336467
End: 336871
Strand: Reverse
Name: 53717956
Synonym: BPSL0315
Alternate gene names: NA
Gene position: 336871-336467 (Counterclockwise)
Preceding gene: 53717957
Following gene: 53717955
Centisome position: 8.27
GC content: 65.19
Gene sequence:
>405_bases ATGTTTGCCGCCCTCCTGCATCCCAGGCTCGCCGATTGCCGCAGGCTCTACCTGCGCAACCACGAGGTGTACATGAACAT CGGCGCCTTCGAGCACGAGAAGCGCGGCGAGCAGCGCGTCGTCATCAATGTCGATCTGTTCGTGCCGCTCGCGCTGACGA CGCCCGTCGAGGACAGGCTGCGCGAAGTCGTCGACTATGATCTGATGAAGCAAAGCGTCGCGCAGTGCGTCGCGCGCGGC CACATCCATCTGCAGGAAACGCTCTGCGACGCGATCGCGGCGAGCCTGCTCGCGCACGACGCGGTGCGCGCGGTGCGCGT GTCCACCGAGAAGCCGGACGCCTACCCCGATTGCGACGCCGTCGGCGTCGAAGTATTTCGCATCAAGGACGAGGAGCGAG CATGA
Upstream 100 bases:
>100_bases CGCGGACGAACGGAATTGACGGGCGCGGCCGGGCGCGGGCATCTCGGTGCCGCGCCCGGCCGCGCCCCTTTGCATGCCTC ACCCTTTGACTGGAACGACC
Downstream 100 bases:
>100_bases ATGCGCCCCATACCCCGCATCTGAACGAAGCCGAAGCGGCCGCCGCCGTCGAGGCGAACGCGGCCGAGCTCGGCCGCCGC GCGCTCACGCGCCGCGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Dihydroneopterin Aldolase Protein
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MFAALLHPRLADCRRLYLRNHEVYMNIGAFEHEKRGEQRVVINVDLFVPLALTTPVEDRLREVVDYDLMKQSVAQCVARG HIHLQETLCDAIAASLLAHDAVRAVRVSTEKPDAYPDCDAVGVEVFRIKDEERA
Sequences:
>Translated_134_residues MFAALLHPRLADCRRLYLRNHEVYMNIGAFEHEKRGEQRVVINVDLFVPLALTTPVEDRLREVVDYDLMKQSVAQCVARG HIHLQETLCDAIAASLLAHDAVRAVRVSTEKPDAYPDCDAVGVEVFRIKDEERA >Mature_134_residues MFAALLHPRLADCRRLYLRNHEVYMNIGAFEHEKRGEQRVVINVDLFVPLALTTPVEDRLREVVDYDLMKQSVAQCVARG HIHLQETLCDAIAASLLAHDAVRAVRVSTEKPDAYPDCDAVGVEVFRIKDEERA
Specific function: Unknown
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15226; Mature: 15226
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAALLHPRLADCRRLYLRNHEVYMNIGAFEHEKRGEQRVVINVDLFVPLALTTPVEDRL CCHHHHCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCCHHHHH REVVDYDLMKQSVAQCVARGHIHLQETLCDAIAASLLAHDAVRAVRVSTEKPDAYPDCDA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC VGVEVFRIKDEERA CCEEEEEECCCCCC >Mature Secondary Structure MFAALLHPRLADCRRLYLRNHEVYMNIGAFEHEKRGEQRVVINVDLFVPLALTTPVEDRL CCHHHHCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCCHHHHH REVVDYDLMKQSVAQCVARGHIHLQETLCDAIAASLLAHDAVRAVRVSTEKPDAYPDCDA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC VGVEVFRIKDEERA CCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA