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The map label for this gene is yagQ [H]

Identifier: 53717879

GI number: 53717879

Start: 246793

End: 247818

Strand: Reverse

Name: yagQ [H]

Synonym: BPSL0237

Alternate gene names: 53717879

Gene position: 247818-246793 (Counterclockwise)

Preceding gene: 53717880

Following gene: 53717872

Centisome position: 6.08

GC content: 71.64

Gene sequence:

>1026_bases
ATGGAAAGCGTGGATCTCGAAGTGCTGCGAACGAGCGCGCGCTGGCTCGACGAAGGCCGCCGCGCGCTGCTCGTGACGGT
CGTGCGAACCTGGGGGTCGTCGCCGCGCCCCGAGGGAGCGATGCTCGCGGTGCGCGACGACGGGCTCGTCGTCGGCTCGG
TGTCGGGCGGCTGCATCGAGGACGATCTGATCGCGCGCGTGCAGGCATCGGGCGTCGCGCACTGGACGCGGCCCGAAGCG
GTCAAGTACGGCGTGACGGCCGAAGAAGCGCATCGCTTCGGCCTGCCGTGCGGCGGCACGATCGAGCTCGTGCTCGAGCC
GCTCACGCCGGCGAGCGGTATCGCCGCGCTGTGCGACGCGCTCGAGCACGGCCGGCTCGTCACGCGCACGCTCGCGCTCG
CGACGGGCGAAGCAACGCTCGCGAGCGCGAGCGCGACCGACGGGTTGCATTTCGACGGCGCGCGCCTCGTGACGGTCCAC
GGGCCGCGCTACCGGATGCTCGTGATCGGCGCGGGGCAACTGTCGCGCTACCTGTGCCAGATCGCGGCGGGGCTCGACTA
TCAGGTGACGGTCTGCGACCCGCGCGAGGCGTATACGGATGCGTGGGACGTGCCGGGCACGCGCATCGTGCGCACGATGC
CCGACGACACCGTGCTCGACATGCGTCTCGACCGCCGCTCGGCGGTGATCGCGTTGACGCACGATCCGAAGCTCGACGAT
CTCGCGCTGATGGAGGCGCTGAAAACGCCGGCGTTCTACGTCGGCGCGCTCGGCTCGCGGCGCAACAGCCAGGCGCGGCG
CGAGCGGCTGCGCGAATTCGACCTGAGCGCCGCGGAGCTCGCGCGCCTGCGCGGGCCGGCGGGCATCTACATCGGCAGCC
GCACGCCGCCCGAGATCGCGGTGTCGATCCTCGCCGAGGTGACGGCGGCGAAGAACGGCGTATCGCTGCCGACGATCCTG
CAGGTGGAAGGTGCGAAGGCCGCGCGGGAAATCGAGGCGAACAGCGGCGTCGCTTGCGGGATGTAG

Upstream 100 bases:

>100_bases
TGCGCGGCCGGGCGCGCCTGCACGCTTTCATCGAACGCGCCATAATCGCGCCATCGAGCGGTCGGCTCCCCCGCCGGCCG
GAAAGCTGCGGGGAAAAATC

Downstream 100 bases:

>100_bases
CCGGCCGGATTCAGCGCGGCGGCAAGCGGCGCAAGCGGCGTCCGGCGCGCCGCCTCGGCCGGCCGGCGGCCGGGGCTGGA
GCCGAAGGCGGCCGACTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MESVDLEVLRTSARWLDEGRRALLVTVVRTWGSSPRPEGAMLAVRDDGLVVGSVSGGCIEDDLIARVQASGVAHWTRPEA
VKYGVTAEEAHRFGLPCGGTIELVLEPLTPASGIAALCDALEHGRLVTRTLALATGEATLASASATDGLHFDGARLVTVH
GPRYRMLVIGAGQLSRYLCQIAAGLDYQVTVCDPREAYTDAWDVPGTRIVRTMPDDTVLDMRLDRRSAVIALTHDPKLDD
LALMEALKTPAFYVGALGSRRNSQARRERLREFDLSAAELARLRGPAGIYIGSRTPPEIAVSILAEVTAAKNGVSLPTIL
QVEGAKAAREIEANSGVACGM

Sequences:

>Translated_341_residues
MESVDLEVLRTSARWLDEGRRALLVTVVRTWGSSPRPEGAMLAVRDDGLVVGSVSGGCIEDDLIARVQASGVAHWTRPEA
VKYGVTAEEAHRFGLPCGGTIELVLEPLTPASGIAALCDALEHGRLVTRTLALATGEATLASASATDGLHFDGARLVTVH
GPRYRMLVIGAGQLSRYLCQIAAGLDYQVTVCDPREAYTDAWDVPGTRIVRTMPDDTVLDMRLDRRSAVIALTHDPKLDD
LALMEALKTPAFYVGALGSRRNSQARRERLREFDLSAAELARLRGPAGIYIGSRTPPEIAVSILAEVTAAKNGVSLPTIL
QVEGAKAAREIEANSGVACGM
>Mature_341_residues
MESVDLEVLRTSARWLDEGRRALLVTVVRTWGSSPRPEGAMLAVRDDGLVVGSVSGGCIEDDLIARVQASGVAHWTRPEA
VKYGVTAEEAHRFGLPCGGTIELVLEPLTPASGIAALCDALEHGRLVTRTLALATGEATLASASATDGLHFDGARLVTVH
GPRYRMLVIGAGQLSRYLCQIAAGLDYQVTVCDPREAYTDAWDVPGTRIVRTMPDDTVLDMRLDRRSAVIALTHDPKLDD
LALMEALKTPAFYVGALGSRRNSQARRERLREFDLSAAELARLRGPAGIYIGSRTPPEIAVSILAEVTAAKNGVSLPTIL
QVEGAKAAREIEANSGVACGM

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786477, Length=310, Percent_Identity=30.3225806451613, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789240, Length=309, Percent_Identity=26.8608414239482, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 36405; Mature: 36405

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESVDLEVLRTSARWLDEGRRALLVTVVRTWGSSPRPEGAMLAVRDDGLVVGSVSGGCIE
CCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCC
DDLIARVQASGVAHWTRPEAVKYGVTAEEAHRFGLPCGGTIELVLEPLTPASGIAALCDA
HHHHHHHHHCCCEECCCCCCEEECCCHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHH
LEHGRLVTRTLALATGEATLASASATDGLHFDGARLVTVHGPRYRMLVIGAGQLSRYLCQ
HHCCCEEEHHEEEECCCHHEECCCCCCCEEECCEEEEEEECCCEEEEEEECHHHHHHHHH
IAAGLDYQVTVCDPREAYTDAWDVPGTRIVRTMPDDTVLDMRLDRRSAVIALTHDPKLDD
HHCCCCEEEEEECCHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCHH
LALMEALKTPAFYVGALGSRRNSQARRERLREFDLSAAELARLRGPAGIYIGSRTPPEIA
HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCHHHH
VSILAEVTAAKNGVSLPTILQVEGAKAAREIEANSGVACGM
HHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MESVDLEVLRTSARWLDEGRRALLVTVVRTWGSSPRPEGAMLAVRDDGLVVGSVSGGCIE
CCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCC
DDLIARVQASGVAHWTRPEAVKYGVTAEEAHRFGLPCGGTIELVLEPLTPASGIAALCDA
HHHHHHHHHCCCEECCCCCCEEECCCHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHH
LEHGRLVTRTLALATGEATLASASATDGLHFDGARLVTVHGPRYRMLVIGAGQLSRYLCQ
HHCCCEEEHHEEEECCCHHEECCCCCCCEEECCEEEEEEECCCEEEEEEECHHHHHHHHH
IAAGLDYQVTVCDPREAYTDAWDVPGTRIVRTMPDDTVLDMRLDRRSAVIALTHDPKLDD
HHCCCCEEEEEECCHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCHH
LALMEALKTPAFYVGALGSRRNSQARRERLREFDLSAAELARLRGPAGIYIGSRTPPEIA
HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCHHHH
VSILAEVTAAKNGVSLPTILQVEGAKAAREIEANSGVACGM
HHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]