Click here to switch to the map view.

The map label for this gene is mreD [C]

Identifier: 53717826

GI number: 53717826

Start: 190111

End: 190623

Strand: Reverse

Name: mreD [C]

Synonym: BPSL0184

Alternate gene names: 53717826

Gene position: 190623-190111 (Counterclockwise)

Preceding gene: 53717827

Following gene: 53717825

Centisome position: 4.68

GC content: 68.23

Gene sequence:

>513_bases
ATGAGCCGCCCCCAGTACATCCTGCAGCCCGTCAATCCGTACTTCATCGTCTTCAGCCTCGCGGCCGCGTTCCTGCTGAA
CCTGATGCCGTGGGGCCGGGTTCCCGGCGTGCCCGATTGCGTCGCGCTCGTGCTGCTGTTCTGGAACATCCACCAGCCGC
GCAAGGTCGGGATGGGCGTGGCGTTCGCGCTCGGCATCCTGATGGACGTCCATGACGCGGGTCTCCTCGGCGAGCACGCG
CTCGCGTACACGCTGCTGTCGTACGGCGCGATCACGATCCACCGGCGCGTGCTATGGCTGCCGCTCGGCGTGCAGATCTT
CTATGTCGCGCCCCTTCTCGTGATCGCGCAGCTCGTGCCGTTCGTGATCCGGCTGCTGATGGGCGCCGCGTTCCCCGGCT
GGAGCTACCTCGTCGACGGCTTCGTCGAGGCGGCGCTGTGGCCGGTCGCGAGCCATCTGCTGCTGATGCCGCAGCGCCGT
CCGGTCGACCCGGACGACACGCGGCCGATCTGA

Upstream 100 bases:

>100_bases
CCGCCGCGCCGCCCGTGCCCGCGCGGAGCCGGCCGGCCGGCCCCGCGCAACCCGCCGCGCCGCTCAAGCCCGCGACCGCG
CCGTCGCCAGGAGCGCCGCG

Downstream 100 bases:

>100_bases
CGCGCCGCGCCGCCAGGACATCCGCTGTGAACGCCCGCCGACCGTCCACCCGCCCGACCGCTCGCGGCCGCCGCGCCGCG
GCCGCCGCGCGGGCGGCCCG

Product: putative rod shape-determining protein

Products: NA

Alternate protein names: Rod Shape-Determining MreD Transmembrane Protein; Rod Shape-Determining Protein; MreD Rod Shape-Determining Protein; Rod Shape-Determining MreD; Rod Shape-Determining Protein Mred; Rod Shape-Determining MRED Transmembrane Protein

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSRPQYILQPVNPYFIVFSLAAAFLLNLMPWGRVPGVPDCVALVLLFWNIHQPRKVGMGVAFALGILMDVHDAGLLGEHA
LAYTLLSYGAITIHRRVLWLPLGVQIFYVAPLLVIAQLVPFVIRLLMGAAFPGWSYLVDGFVEAALWPVASHLLLMPQRR
PVDPDDTRPI

Sequences:

>Translated_170_residues
MSRPQYILQPVNPYFIVFSLAAAFLLNLMPWGRVPGVPDCVALVLLFWNIHQPRKVGMGVAFALGILMDVHDAGLLGEHA
LAYTLLSYGAITIHRRVLWLPLGVQIFYVAPLLVIAQLVPFVIRLLMGAAFPGWSYLVDGFVEAALWPVASHLLLMPQRR
PVDPDDTRPI
>Mature_169_residues
SRPQYILQPVNPYFIVFSLAAAFLLNLMPWGRVPGVPDCVALVLLFWNIHQPRKVGMGVAFALGILMDVHDAGLLGEHAL
AYTLLSYGAITIHRRVLWLPLGVQIFYVAPLLVIAQLVPFVIRLLMGAAFPGWSYLVDGFVEAALWPVASHLLLMPQRRP
VDPDDTRPI

Specific function: Involved In Formation Of The Rod Shape Of The Cell. May Also Contribute To Regulation Of Formation Of Penicillin-Binding Proteins. [C]

COG id: COG2891

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18907; Mature: 18776

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPQYILQPVNPYFIVFSLAAAFLLNLMPWGRVPGVPDCVALVLLFWNIHQPRKVGMGV
CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH
AFALGILMDVHDAGLLGEHALAYTLLSYGAITIHRRVLWLPLGVQIFYVAPLLVIAQLVP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVIRLLMGAAFPGWSYLVDGFVEAALWPVASHLLLMPQRRPVDPDDTRPI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRPQYILQPVNPYFIVFSLAAAFLLNLMPWGRVPGVPDCVALVLLFWNIHQPRKVGMGV
CCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH
AFALGILMDVHDAGLLGEHALAYTLLSYGAITIHRRVLWLPLGVQIFYVAPLLVIAQLVP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVIRLLMGAAFPGWSYLVDGFVEAALWPVASHLLLMPQRRPVDPDDTRPI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA