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The map label for this gene is rsmI [H]

Identifier: 52843189

GI number: 52843189

Start: 3386253

End: 3387104

Strand: Direct

Name: rsmI [H]

Synonym: lpg2996

Alternate gene names: 52843189

Gene position: 3386253-3387104 (Clockwise)

Preceding gene: 52843172

Following gene: 52843190

Centisome position: 99.66

GC content: 40.73

Gene sequence:

>852_bases
ATGACAAACACTCTAGCAACAGGTTTAGGAACTCTCTATATAGTTGCTACCCCAATAGGAAATCGCGAAGATATTTCTTT
CAGGGCTCTTAATACCTTGAAAAGCGTTGATTTAATACTTGCTGAAGACACACGCCATTCCATGCAATTATTGACTTCGC
TAGGGATAAAAAATAATTTAGCTTCATTGCACACCCACAATGAAGCGAACAAAAGCAATGAGATAATTGAGCTGCTGCTC
CATGGAAAATCAATCGCACTAATCAGTGATGCAGGCACGCCCTTGATTAGCGATCCTGGATTTCCTTTAGTGAAACAGGC
TCGCCAGCACCATATCCCTGTTGTGCCTGTTCCTGGCGCATGCGCTTTAATTGCTGCGTTAAGTGCTGCCGGGGTACCCT
GCGATTCTTTTGCCTTTTTAGGTTTTCTTCCGGCCAAACAAAGTGCCAGAAAACATGCCCTGGAATCATCGCGGTCAGTG
CCTTATACCATAGTATTCTATGAATCAACTCACAGAATCATAGACTGTCTTAACGATATTGCAGAGATCTATGGCCAAGA
TTATGAACTTGTTTTAGCAAAAGAAATAACCAAAACCTTTGAACGATTTGTATCTGGAAAAATAAAAGAAATTAAAGACT
GGCTACTCAGTGAACCCGGTCATATCAAAGGTGAATTTGTTTTGATTTTTCCACCTCGCTCAACAAATAAAGACCCCAAC
TCGCATGAAGAACTACTCAAGATATTGTTGGAAGAGTTGCCTTTAAAGCAGGCTGTGGCTATTGCATGCAGATTGACTAA
TGCCAATAAAAATCAGCTCTATGAAGAGGCATTGAAATTAAAAGAGAGCTAA

Upstream 100 bases:

>100_bases
AAAGCAAAAAAAGAGATACCAATACTAAGAACATGCGAAGTTTTAATTGTTTAATTAACATGTTAATTCGCCAAATTTGC
TTTTCGCAAGAGGATAAACT

Downstream 100 bases:

>100_bases
AAAGAATATTGATCGCTTATTTCCATAACATTGTCCGTAAATGACCTTTTTTTGTCCTCTAAGACCAAGCAAAGATATCG
CCTTTTAAGCTATATTGTTT

Product: tetrapyrrole (corrin/porphyrin) methylase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTNTLATGLGTLYIVATPIGNREDISFRALNTLKSVDLILAEDTRHSMQLLTSLGIKNNLASLHTHNEANKSNEIIELLL
HGKSIALISDAGTPLISDPGFPLVKQARQHHIPVVPVPGACALIAALSAAGVPCDSFAFLGFLPAKQSARKHALESSRSV
PYTIVFYESTHRIIDCLNDIAEIYGQDYELVLAKEITKTFERFVSGKIKEIKDWLLSEPGHIKGEFVLIFPPRSTNKDPN
SHEELLKILLEELPLKQAVAIACRLTNANKNQLYEEALKLKES

Sequences:

>Translated_283_residues
MTNTLATGLGTLYIVATPIGNREDISFRALNTLKSVDLILAEDTRHSMQLLTSLGIKNNLASLHTHNEANKSNEIIELLL
HGKSIALISDAGTPLISDPGFPLVKQARQHHIPVVPVPGACALIAALSAAGVPCDSFAFLGFLPAKQSARKHALESSRSV
PYTIVFYESTHRIIDCLNDIAEIYGQDYELVLAKEITKTFERFVSGKIKEIKDWLLSEPGHIKGEFVLIFPPRSTNKDPN
SHEELLKILLEELPLKQAVAIACRLTNANKNQLYEEALKLKES
>Mature_282_residues
TNTLATGLGTLYIVATPIGNREDISFRALNTLKSVDLILAEDTRHSMQLLTSLGIKNNLASLHTHNEANKSNEIIELLLH
GKSIALISDAGTPLISDPGFPLVKQARQHHIPVVPVPGACALIAALSAAGVPCDSFAFLGFLPAKQSARKHALESSRSVP
YTIVFYESTHRIIDCLNDIAEIYGQDYELVLAKEITKTFERFVSGKIKEIKDWLLSEPGHIKGEFVLIFPPRSTNKDPNS
HEELLKILLEELPLKQAVAIACRLTNANKNQLYEEALKLKES

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=272, Percent_Identity=47.7941176470588, Blast_Score=238, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31138; Mature: 31007

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTLATGLGTLYIVATPIGNREDISFRALNTLKSVDLILAEDTRHSMQLLTSLGIKNNL
CCCCHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHCCCCCH
ASLHTHNEANKSNEIIELLLHGKSIALISDAGTPLISDPGFPLVKQARQHHIPVVPVPGA
HHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEECCCH
CALIAALSAAGVPCDSFAFLGFLPAKQSARKHALESSRSVPYTIVFYESTHRIIDCLNDI
HHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHH
AEIYGQDYELVLAKEITKTFERFVSGKIKEIKDWLLSEPGHIKGEFVLIFPPRSTNKDPN
HHHCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC
SHEELLKILLEELPLKQAVAIACRLTNANKNQLYEEALKLKES
HHHHHHHHHHHHCCHHHHHHHHHEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNTLATGLGTLYIVATPIGNREDISFRALNTLKSVDLILAEDTRHSMQLLTSLGIKNNL
CCCHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHCCCCCH
ASLHTHNEANKSNEIIELLLHGKSIALISDAGTPLISDPGFPLVKQARQHHIPVVPVPGA
HHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEECCCH
CALIAALSAAGVPCDSFAFLGFLPAKQSARKHALESSRSVPYTIVFYESTHRIIDCLNDI
HHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHH
AEIYGQDYELVLAKEITKTFERFVSGKIKEIKDWLLSEPGHIKGEFVLIFPPRSTNKDPN
HHHCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC
SHEELLKILLEELPLKQAVAIACRLTNANKNQLYEEALKLKES
HHHHHHHHHHHHCCHHHHHHHHHEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]