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The map label for this gene is panD

Identifier: 52843123

GI number: 52843123

Start: 3315396

End: 3315797

Strand: Direct

Name: panD

Synonym: lpg2929

Alternate gene names: 52843123

Gene position: 3315396-3315797 (Clockwise)

Preceding gene: 52843115

Following gene: 52843124

Centisome position: 97.58

GC content: 41.54

Gene sequence:

>402_bases
ATGGCTTATAGAAAAATGCTTAAATCAAAAATTCATCGTGCTTGCGTCACACAGGCAGATCTGGATTATGAAGGGAGTAT
CACTATTTCACCAGAGCTTTTAAAAGTGGCAAACATATTGCCATATGAAGCGGTTAATGTCTGGAATATCACTGCCGGAA
CCCGATTTGAAACTTATGCCATTACAGGTGAAAAGGGTTCAACGGATATCTGTGTCAATGGAGCGGCAGCTCATTTGGTA
ACCCCCGGTGATTTGGTTATTATCGCCTCTTTTACGCAAATTCTGGAAGAGGATTGCGCAGCACATGAACCCACTGTTGT
TTTTGTTGATCAATTCAATCGTCTGAAAGAAATCCGACCTGAAAGAATCGGTGTTAAAAGTAGAATTCCTAACCCGGCTT
GA

Upstream 100 bases:

>100_bases
CTTTTTTTAGTTATTTCAATCTGGAAAAAGCCATGTAACAAATAAACTCAGTTGTATTTAGCCAGTTGCTTTTTCCAGAC
TCAAATTTAGGAAGCAAATA

Downstream 100 bases:

>100_bases
ATTGGACCCATAGCAATGGGTTCATATGCTACTTTGTCAGACAATGATCAAAAATAGAAAAATCAAATGGAATGGTTTAT
TCTATGATCTCGGCATTCAA

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase [H]

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MAYRKMLKSKIHRACVTQADLDYEGSITISPELLKVANILPYEAVNVWNITAGTRFETYAITGEKGSTDICVNGAAAHLV
TPGDLVIIASFTQILEEDCAAHEPTVVFVDQFNRLKEIRPERIGVKSRIPNPA

Sequences:

>Translated_133_residues
MAYRKMLKSKIHRACVTQADLDYEGSITISPELLKVANILPYEAVNVWNITAGTRFETYAITGEKGSTDICVNGAAAHLV
TPGDLVIIASFTQILEEDCAAHEPTVVFVDQFNRLKEIRPERIGVKSRIPNPA
>Mature_132_residues
AYRKMLKSKIHRACVTQADLDYEGSITISPELLKVANILPYEAVNVWNITAGTRFETYAITGEKGSTDICVNGAAAHLVT
PGDLVIIASFTQILEEDCAAHEPTVVFVDQFNRLKEIRPERIGVKSRIPNPA

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=113, Percent_Identity=49.5575221238938, Blast_Score=116, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 14658; Mature: 14527

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYRKMLKSKIHRACVTQADLDYEGSITISPELLKVANILPYEAVNVWNITAGTRFETYA
CHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
ITGEKGSTDICVNGAAAHLVTPGDLVIIASFTQILEEDCAAHEPTVVFVDQFNRLKEIRP
EECCCCCCEEEECCCEEEEECCCCEEEEHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCH
ERIGVKSRIPNPA
HHCCHHCCCCCCC
>Mature Secondary Structure 
AYRKMLKSKIHRACVTQADLDYEGSITISPELLKVANILPYEAVNVWNITAGTRFETYA
HHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
ITGEKGSTDICVNGAAAHLVTPGDLVIIASFTQILEEDCAAHEPTVVFVDQFNRLKEIRP
EECCCCCCEEEECCCEEEEECCCCEEEEHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCH
ERIGVKSRIPNPA
HHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA