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The map label for this gene is 52843115

Identifier: 52843115

GI number: 52843115

Start: 3307008

End: 3307334

Strand: Direct

Name: 52843115

Synonym: lpg2921

Alternate gene names: NA

Gene position: 3307008-3307334 (Clockwise)

Preceding gene: 52843114

Following gene: 52843123

Centisome position: 97.33

GC content: 38.53

Gene sequence:

>327_bases
ATGAATGAGCAATTAAACCATCTGTATGGCTTGCCCAGCCATGCTATTGAAGCATTGAAATGTGTCTTTAAAGAGTATTC
TCAAATTGATAATGCGATTCTCTACGGATCTCGTGCCAAAGGCACATATCATCAGGGCTCAGATATTGATCTTTGCCTTA
CCGGAAACTTATTAGGGATCACTGAATTACTTGCTATTGAAAATAAAATTGATGATTTACTGTTACCCTGGAAGGTTGAT
ATATCCCTGAAACACACCATAGACAATCCCGATTTGCTTGAACACATTGAGCGAGCGGGTATCCTGTTTTATACAAAAGA
ATCGTAG

Upstream 100 bases:

>100_bases
TACAACCAATCCGTTGCCGATGAAATTGTCAAAAATATTATTAATTTCTACCACACCTCTTTTCAGGCATTCCTGGAAAA
AATGCAAGGTCTGAAAGAGC

Downstream 100 bases:

>100_bases
GACTTTAGGGTCTGTTGACATTTCGCTGGCTTTTCGGCCAAGATAGTAGAAATGTCAACAGACCCTAATAAACTATTCAC
TGCGTAAAGAAACCATCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Polymerase Beta Subunit; DNA Polymerase Beta Domain-Containing Protein Region; DNA Polymerase Subunit Beta; DNA Polymerase Beta-Like Region; Nucleotidyltransferase; Nucleotidyltransferase Domain-Containing Protein; Xin-Antitoxin System Toxin Component; DNA Polymerase Beta Domain-Containing Protein; O-Succinylbenzoic Acid Synthetase; HsdR-Like Type I Restriction Deoxyribonuclease

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MNEQLNHLYGLPSHAIEALKCVFKEYSQIDNAILYGSRAKGTYHQGSDIDLCLTGNLLGITELLAIENKIDDLLLPWKVD
ISLKHTIDNPDLLEHIERAGILFYTKES

Sequences:

>Translated_108_residues
MNEQLNHLYGLPSHAIEALKCVFKEYSQIDNAILYGSRAKGTYHQGSDIDLCLTGNLLGITELLAIENKIDDLLLPWKVD
ISLKHTIDNPDLLEHIERAGILFYTKES
>Mature_108_residues
MNEQLNHLYGLPSHAIEALKCVFKEYSQIDNAILYGSRAKGTYHQGSDIDLCLTGNLLGITELLAIENKIDDLLLPWKVD
ISLKHTIDNPDLLEHIERAGILFYTKES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12195; Mature: 12195

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQLNHLYGLPSHAIEALKCVFKEYSQIDNAILYGSRAKGTYHQGSDIDLCLTGNLLGI
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEECCHHHH
TELLAIENKIDDLLLPWKVDISLKHTIDNPDLLEHIERAGILFYTKES
HHHHHHHHHHCCEECCEEECEEEEECCCCHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MNEQLNHLYGLPSHAIEALKCVFKEYSQIDNAILYGSRAKGTYHQGSDIDLCLTGNLLGI
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEECCHHHH
TELLAIENKIDDLLLPWKVDISLKHTIDNPDLLEHIERAGILFYTKES
HHHHHHHHHHCCEECCEEECEEEEECCCCHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA