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The map label for this gene is 52843119

Identifier: 52843119

GI number: 52843119

Start: 3310421

End: 3312049

Strand: Reverse

Name: 52843119

Synonym: lpg2925

Alternate gene names: NA

Gene position: 3312049-3310421 (Counterclockwise)

Preceding gene: 52843120

Following gene: 52843118

Centisome position: 97.48

GC content: 41.56

Gene sequence:

>1629_bases
GTGAAATTTTTAAATAAAAGCACAGCATTGTTACCGGTAATTATTTTATCGGGCCTGATTAGTTTTCATGCCTCAAGTGC
CAAGACTTCTTCAAATGCTGATAATTCACTTTATTCCTGGACAGAAAATCCTTCAGCTGAAGCTCAGAGAGTGGAGCAAG
CGGAGGAAAGACTAAAGGCAGCCATTGCCAACCCGGAATACATGCTGAAAAATTGGATAGAGTTGCCTACCTCGCCTGAA
TCAAAAAAGAAAACAAGGCATCAGTTGACGATAAGAGAAGCCATACTGTTGGCCTTGCGTTATAATCCTAATATCCAGAA
TGCGGAATTAGACCGTATTATTCAGCGCTATCAATTGCGTTTGGCTAATAATGAGTTTGAATTGCAATATGCTCTGGGTG
CTTCAGGGATTGTGCAAAAAAGTACTTTTGAGGGGATAGGCAGTTCTACGAATCATTCTTTTCTGGCCAGTCCTGAATTG
GATTTGAAAACCAAAATAGGCACCAAGGCGTCCGTATCCATCGATAACAATGTTTCCACCAACAACAGCTATAATCCGGT
ATTGAATTTATCCATTACTCAGCCTTTGCTCCGTGGATTTGGCAAGTCAGCGAATGAAGCAAAACTGCTGGATGCGATTG
ATAAGGAATGGCTAAATAAATTAAGTTTACAGCAATCGGTTATGGATCAGATTACGCAGGTGATTACGGCGTACAGGGCT
TTGATTTTAAGTGGGAACAATTTAGAGAATCAGCGCTTGCAATTGGAAGAAGCCAGAAAATCCTATCGTATTAATGAAAA
AAAGATTGCAGCGGGACAATTAGAACCTACCGGAAATATTCAGCAATCCTATCAGATAGAATCTTTGAGTTTGATGGTAG
AACAAGGTGAAAATGATTTTAAATTAGCCTCTCAGGAATTATTGCAAATGATAGGGCTTGATCCGGATTTGCATATTTCA
GTTCCCAGTGATGTGACGATAAAGGAAATTATAGTGCCTGACTTGCAAGAATCCATTGCCATCGCATTAAGTCACAATAC
TCAGTATCTGGCCCAGAAAATGGCTTTGCGTGCGGATGAGAGGGCTTACACTGTTGCAAAAAATCAGCAACTTTGGCAGC
TTGATTTGGCGGGTACTGTGCAAGGCGGCGCAGTCAACGATGTCACCGGAACCAGCAGTGGTTTAAGCAGCATTTACAAT
GGGAATAATATCACGGAATCAGCCAGGGTCACCCTGACCATTCCATTGAATGACATTGGACGGCGTAGTCAATTAATTAA
TGCTAAAGTCCAGTTGGAAAAAGACAAAATCAATCTTATCGCAGCCAAAAGAGCTTTAATTACCAGTGTAACCAATACCA
TCAATAATATTCAAAGCTTGGCCAAGCGCTATGAGCTGGCACAAAAGCAAGTCAAATTGGCAGAGCAGTCTTACGCTTTG
GAAAAGAAAAAACAGCAGGCAGGAATATCCAGCGCCCTGGATGTGAACAATACTCAGAATCAATTGATTCAGGCACAGTC
AGGATTGATAGGGGCAAAAATTGCGTATCTCAATCAGTTATCCGCGTTGCAAAGGATTTTAGGGACCACGCTGGATTACT
GGCAGATTAAACTAAGGTATGGCGGATGA

Upstream 100 bases:

>100_bases
CTGCAGGACAGGCAACGCTTTTCGGTACCCGGGTATGGGGTTAGTCGTTTTGAATAACCTTGATGGATAGGCATTTTTAT
AAACACAGGCGATAACAACG

Downstream 100 bases:

>100_bases
ACAATTATCTGAAAATATTCTCTATAGTGTCATTGATTTTAATGCTGGTTTCTTGTGGCAGTTCTGATAAGCCGCAAACC
TCTTCATTAAAAACGTATGA

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Efflux Family Protein; Outer Membrane Lipoprotein; Type I Secretion Outer Membrane Protein; Outer Efflux Pump Domain-Containing Protein

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MKFLNKSTALLPVIILSGLISFHASSAKTSSNADNSLYSWTENPSAEAQRVEQAEERLKAAIANPEYMLKNWIELPTSPE
SKKKTRHQLTIREAILLALRYNPNIQNAELDRIIQRYQLRLANNEFELQYALGASGIVQKSTFEGIGSSTNHSFLASPEL
DLKTKIGTKASVSIDNNVSTNNSYNPVLNLSITQPLLRGFGKSANEAKLLDAIDKEWLNKLSLQQSVMDQITQVITAYRA
LILSGNNLENQRLQLEEARKSYRINEKKIAAGQLEPTGNIQQSYQIESLSLMVEQGENDFKLASQELLQMIGLDPDLHIS
VPSDVTIKEIIVPDLQESIAIALSHNTQYLAQKMALRADERAYTVAKNQQLWQLDLAGTVQGGAVNDVTGTSSGLSSIYN
GNNITESARVTLTIPLNDIGRRSQLINAKVQLEKDKINLIAAKRALITSVTNTINNIQSLAKRYELAQKQVKLAEQSYAL
EKKKQQAGISSALDVNNTQNQLIQAQSGLIGAKIAYLNQLSALQRILGTTLDYWQIKLRYGG

Sequences:

>Translated_542_residues
MKFLNKSTALLPVIILSGLISFHASSAKTSSNADNSLYSWTENPSAEAQRVEQAEERLKAAIANPEYMLKNWIELPTSPE
SKKKTRHQLTIREAILLALRYNPNIQNAELDRIIQRYQLRLANNEFELQYALGASGIVQKSTFEGIGSSTNHSFLASPEL
DLKTKIGTKASVSIDNNVSTNNSYNPVLNLSITQPLLRGFGKSANEAKLLDAIDKEWLNKLSLQQSVMDQITQVITAYRA
LILSGNNLENQRLQLEEARKSYRINEKKIAAGQLEPTGNIQQSYQIESLSLMVEQGENDFKLASQELLQMIGLDPDLHIS
VPSDVTIKEIIVPDLQESIAIALSHNTQYLAQKMALRADERAYTVAKNQQLWQLDLAGTVQGGAVNDVTGTSSGLSSIYN
GNNITESARVTLTIPLNDIGRRSQLINAKVQLEKDKINLIAAKRALITSVTNTINNIQSLAKRYELAQKQVKLAEQSYAL
EKKKQQAGISSALDVNNTQNQLIQAQSGLIGAKIAYLNQLSALQRILGTTLDYWQIKLRYGG
>Mature_542_residues
MKFLNKSTALLPVIILSGLISFHASSAKTSSNADNSLYSWTENPSAEAQRVEQAEERLKAAIANPEYMLKNWIELPTSPE
SKKKTRHQLTIREAILLALRYNPNIQNAELDRIIQRYQLRLANNEFELQYALGASGIVQKSTFEGIGSSTNHSFLASPEL
DLKTKIGTKASVSIDNNVSTNNSYNPVLNLSITQPLLRGFGKSANEAKLLDAIDKEWLNKLSLQQSVMDQITQVITAYRA
LILSGNNLENQRLQLEEARKSYRINEKKIAAGQLEPTGNIQQSYQIESLSLMVEQGENDFKLASQELLQMIGLDPDLHIS
VPSDVTIKEIIVPDLQESIAIALSHNTQYLAQKMALRADERAYTVAKNQQLWQLDLAGTVQGGAVNDVTGTSSGLSSIYN
GNNITESARVTLTIPLNDIGRRSQLINAKVQLEKDKINLIAAKRALITSVTNTINNIQSLAKRYELAQKQVKLAEQSYAL
EKKKQQAGISSALDVNNTQNQLIQAQSGLIGAKIAYLNQLSALQRILGTTLDYWQIKLRYGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60003; Mature: 60003

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLNKSTALLPVIILSGLISFHASSAKTSSNADNSLYSWTENPSAEAQRVEQAEERLKA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHH
AIANPEYMLKNWIELPTSPESKKKTRHQLTIREAILLALRYNPNIQNAELDRIIQRYQLR
HHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHH
LANNEFELQYALGASGIVQKSTFEGIGSSTNHSFLASPELDLKTKIGTKASVSIDNNVST
HCCCCEEEEEEECCCCCEEHHHHHCCCCCCCCCEEECCCCCCEECCCCEEEEEECCCCCC
NNSYNPVLNLSITQPLLRGFGKSANEAKLLDAIDKEWLNKLSLQQSVMDQITQVITAYRA
CCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILSGNNLENQRLQLEEARKSYRINEKKIAAGQLEPTGNIQQSYQIESLSLMVEQGENDF
HHCCCCCCCHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCHHEEHHHHHHHHHCCCCHH
KLASQELLQMIGLDPDLHISVPSDVTIKEIIVPDLQESIAIALSHNTQYLAQKMALRADE
HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCHHHEEEEEECCHHHHHHHHHHHCCC
RAYTVAKNQQLWQLDLAGTVQGGAVNDVTGTSSGLSSIYNGNNITESARVTLTIPLNDIG
CCEEEECCCCEEEEEECCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECHHCC
RRSQLINAKVQLEKDKINLIAAKRALITSVTNTINNIQSLAKRYELAQKQVKLAEQSYAL
CHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKKKQQAGISSALDVNNTQNQLIQAQSGLIGAKIAYLNQLSALQRILGTTLDYWQIKLRY
HHHHHHCCCCHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE
GG
CC
>Mature Secondary Structure
MKFLNKSTALLPVIILSGLISFHASSAKTSSNADNSLYSWTENPSAEAQRVEQAEERLKA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHH
AIANPEYMLKNWIELPTSPESKKKTRHQLTIREAILLALRYNPNIQNAELDRIIQRYQLR
HHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHH
LANNEFELQYALGASGIVQKSTFEGIGSSTNHSFLASPELDLKTKIGTKASVSIDNNVST
HCCCCEEEEEEECCCCCEEHHHHHCCCCCCCCCEEECCCCCCEECCCCEEEEEECCCCCC
NNSYNPVLNLSITQPLLRGFGKSANEAKLLDAIDKEWLNKLSLQQSVMDQITQVITAYRA
CCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILSGNNLENQRLQLEEARKSYRINEKKIAAGQLEPTGNIQQSYQIESLSLMVEQGENDF
HHCCCCCCCHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCHHEEHHHHHHHHHCCCCHH
KLASQELLQMIGLDPDLHISVPSDVTIKEIIVPDLQESIAIALSHNTQYLAQKMALRADE
HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCHHHEEEEEECCHHHHHHHHHHHCCC
RAYTVAKNQQLWQLDLAGTVQGGAVNDVTGTSSGLSSIYNGNNITESARVTLTIPLNDIG
CCEEEECCCCEEEEEECCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECHHCC
RRSQLINAKVQLEKDKINLIAAKRALITSVTNTINNIQSLAKRYELAQKQVKLAEQSYAL
CHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKKKQQAGISSALDVNNTQNQLIQAQSGLIGAKIAYLNQLSALQRILGTTLDYWQIKLRY
HHHHHHCCCCHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE
GG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA