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The map label for this gene is 52843093

Identifier: 52843093

GI number: 52843093

Start: 3280539

End: 3282152

Strand: Reverse

Name: 52843093

Synonym: lpg2898

Alternate gene names: NA

Gene position: 3282152-3280539 (Counterclockwise)

Preceding gene: 52843102

Following gene: 52843092

Centisome position: 96.6

GC content: 42.01

Gene sequence:

>1614_bases
GTGGGCTCTTTGGTTATAAAAAAATCTATTATTGCGGCGCTAGTTGTTGCACTGGGTATTGCAGGGCAATCTGTACAAGC
TGAGTCTGTACCAGATGAAACGTTACAATCTGAAAAAGTACAGACGGAAAAAGTTCAGGCCGAAAAAACAGAAACAGATT
TGTTTTCTCCCGTAGAGCAGATCATGAATCCTTTTTATCCCAAATACCCCCCGACCAAGCCAGCTACTGGCGAGCAAGCA
GAGTTGATTAAACGTGGTGAGTATCTGGCAAAAATGGGTGATTGCATTGCCTGCCATACCGACGTTGAAGGGGGTACTCC
CGCTTATGCTGGTGGTTTACCTATTAATACGCCTTTTGGCTTATTCTATAGCCCTAATATTACCCCCGATAAAGAAACGG
GTATAGGAAATTGGACAGAAAAAGATTTTATTCGCGCTCTTAAAGATGGTCGTGATCCTAAAGGCAGAAATTATTTTCCA
GTATTTCCATATGTCTATTTTTCCAAGATAACTGACGATGATGCTCGTGCTCTGTATGCTTATTTTATGAGCATTCCTCC
CGTTAAGTTAAAGAACAAATCATTGCCATTTCCTTTTGGTGTCCCCGGGGCTCGCTTTGCTTTATGGGGATGGAACTTGT
TGTTTTTCTTCCCTCAGGAAAATTCCATTGAATATGATCCTGATAAATCCCCTGAATGGAATCGTGGAAGGTATATAGTC
GATACTTTAGGGCATTGCAGTATGTGCCATACCCCAATGAATATATTTGGATCAGCGAAAAACAGATACTATCTAACCGG
TAGTTTTATCGATGGATATTGGGCTCCCAATATCACCAAATATGGATTGGAATCAGCGAGCCATCAAGAGGTAGCCGATG
TATTTAAGGCTGGCGAATTAATTAATAAAGCGGGGCCCGTAGCTGGTCCTATGGCTGAAGTGAATCATAATAGCTTGAGT
CACTTGACTGAAGAAGACAGGTTGGCTATTGCAACTTATCTCAAGACAGTAGAGAGTGAAGAATACCTTGGTGTTTCTCC
TTCTGATTTGCCTCCTAGCGTTGCACGTGGAAGACAAGTGTATTTGAAGGCCTGTCTGATTTGTCATAAGGACAATAAAA
TGGGTGCTCCAGTGATTGGTGATTCAGCCAGCTGGTATACACGCTTGAAAAACAGCGGTTTAACTGGTTTATATCGACAT
GCCATTTATGGCTATAACCAAATGCCGGTTAAAGGCGCTTGTGTGACTTGTTCCGACAATGACATTATTTCAGCGGTTGA
TTATTTGCTCAATGCGTCCCTGACCCGGTCTCAGTGGCAAGATTTGGCGTCTGGCGGTGTTAAAAAATACCCTGCCAGTG
GAAAGGCTGTATATAATGAAAACTGTGCTGTTTGCCATAATGAAGGCAAATTGGGTGCTCCTAAAATAGGCGATAAAGTG
ACCTGGAAGCCGCTGATAGCACAAAATATGGATGTTTTGATCGAAAACACAATCAGAGGGAAAAATCATTTGCCAAATGG
TGGTTGCAATCATTGTTCGACAGATGAAGTAATTGAAGCGATCAAATACATGGTCAGTCAATCTAAAACCGAAGGTAATT
ATTCTTTGTGGTAG

Upstream 100 bases:

>100_bases
TTGAATAACGTTGCAACTTGATAAGCGAGGAGTATACAATGCGACAATTATTCTGTCTCCTCATGAGAGTCGTGAAAAAT
AAGAACAAATAGGAGGGAGC

Downstream 100 bases:

>100_bases
GGTTACCAGCAACATTTGAATAAATGAACTAGCTTAAACATTAGTCGGTTTCCCGGCTACTTGAAGAGATGAGGGATTGG
GATGTTAAACAGGTTAAATA

Product: cytochrome c

Products: NA

Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]

Number of amino acids: Translated: 537; Mature: 536

Protein sequence:

>537_residues
MGSLVIKKSIIAALVVALGIAGQSVQAESVPDETLQSEKVQTEKVQAEKTETDLFSPVEQIMNPFYPKYPPTKPATGEQA
ELIKRGEYLAKMGDCIACHTDVEGGTPAYAGGLPINTPFGLFYSPNITPDKETGIGNWTEKDFIRALKDGRDPKGRNYFP
VFPYVYFSKITDDDARALYAYFMSIPPVKLKNKSLPFPFGVPGARFALWGWNLLFFFPQENSIEYDPDKSPEWNRGRYIV
DTLGHCSMCHTPMNIFGSAKNRYYLTGSFIDGYWAPNITKYGLESASHQEVADVFKAGELINKAGPVAGPMAEVNHNSLS
HLTEEDRLAIATYLKTVESEEYLGVSPSDLPPSVARGRQVYLKACLICHKDNKMGAPVIGDSASWYTRLKNSGLTGLYRH
AIYGYNQMPVKGACVTCSDNDIISAVDYLLNASLTRSQWQDLASGGVKKYPASGKAVYNENCAVCHNEGKLGAPKIGDKV
TWKPLIAQNMDVLIENTIRGKNHLPNGGCNHCSTDEVIEAIKYMVSQSKTEGNYSLW

Sequences:

>Translated_537_residues
MGSLVIKKSIIAALVVALGIAGQSVQAESVPDETLQSEKVQTEKVQAEKTETDLFSPVEQIMNPFYPKYPPTKPATGEQA
ELIKRGEYLAKMGDCIACHTDVEGGTPAYAGGLPINTPFGLFYSPNITPDKETGIGNWTEKDFIRALKDGRDPKGRNYFP
VFPYVYFSKITDDDARALYAYFMSIPPVKLKNKSLPFPFGVPGARFALWGWNLLFFFPQENSIEYDPDKSPEWNRGRYIV
DTLGHCSMCHTPMNIFGSAKNRYYLTGSFIDGYWAPNITKYGLESASHQEVADVFKAGELINKAGPVAGPMAEVNHNSLS
HLTEEDRLAIATYLKTVESEEYLGVSPSDLPPSVARGRQVYLKACLICHKDNKMGAPVIGDSASWYTRLKNSGLTGLYRH
AIYGYNQMPVKGACVTCSDNDIISAVDYLLNASLTRSQWQDLASGGVKKYPASGKAVYNENCAVCHNEGKLGAPKIGDKV
TWKPLIAQNMDVLIENTIRGKNHLPNGGCNHCSTDEVIEAIKYMVSQSKTEGNYSLW
>Mature_536_residues
GSLVIKKSIIAALVVALGIAGQSVQAESVPDETLQSEKVQTEKVQAEKTETDLFSPVEQIMNPFYPKYPPTKPATGEQAE
LIKRGEYLAKMGDCIACHTDVEGGTPAYAGGLPINTPFGLFYSPNITPDKETGIGNWTEKDFIRALKDGRDPKGRNYFPV
FPYVYFSKITDDDARALYAYFMSIPPVKLKNKSLPFPFGVPGARFALWGWNLLFFFPQENSIEYDPDKSPEWNRGRYIVD
TLGHCSMCHTPMNIFGSAKNRYYLTGSFIDGYWAPNITKYGLESASHQEVADVFKAGELINKAGPVAGPMAEVNHNSLSH
LTEEDRLAIATYLKTVESEEYLGVSPSDLPPSVARGRQVYLKACLICHKDNKMGAPVIGDSASWYTRLKNSGLTGLYRHA
IYGYNQMPVKGACVTCSDNDIISAVDYLLNASLTRSQWQDLASGGVKKYPASGKAVYNENCAVCHNEGKLGAPKIGDKVT
WKPLIAQNMDVLIENTIRGKNHLPNGGCNHCSTDEVIEAIKYMVSQSKTEGNYSLW

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 59204; Mature: 59073

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLVIKKSIIAALVVALGIAGQSVQAESVPDETLQSEKVQTEKVQAEKTETDLFSPVEQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMNPFYPKYPPTKPATGEQAELIKRGEYLAKMGDCIACHTDVEGGTPAYAGGLPINTPFG
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCC
LFYSPNITPDKETGIGNWTEKDFIRALKDGRDPKGRNYFPVFPYVYFSKITDDDARALYA
EEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECHHHHHHHCCCHHHHHHHH
YFMSIPPVKLKNKSLPFPFGVPGARFALWGWNLLFFFPQENSIEYDPDKSPEWNRGRYIV
HHHHCCCEEECCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEE
DTLGHCSMCHTPMNIFGSAKNRYYLTGSFIDGYWAPNITKYGLESASHQEVADVFKAGEL
EHHCCHHHHCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHH
INKAGPVAGPMAEVNHNSLSHLTEEDRLAIATYLKTVESEEYLGVSPSDLPPSVARGRQV
HHHCCCCCCCHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
YLKACLICHKDNKMGAPVIGDSASWYTRLKNSGLTGLYRHAIYGYNQMPVKGACVTCSDN
HHHHHHHEECCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCC
DIISAVDYLLNASLTRSQWQDLASGGVKKYPASGKAVYNENCAVCHNEGKLGAPKIGDKV
CHHHHHHHHHCCCCCHHHHHHHHHCCCEECCCCCCEEECCCCEEEECCCCCCCCCCCCCC
TWKPLIAQNMDVLIENTIRGKNHLPNGGCNHCSTDEVIEAIKYMVSQSKTEGNYSLW
EECHHHHCCCHHEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GSLVIKKSIIAALVVALGIAGQSVQAESVPDETLQSEKVQTEKVQAEKTETDLFSPVEQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMNPFYPKYPPTKPATGEQAELIKRGEYLAKMGDCIACHTDVEGGTPAYAGGLPINTPFG
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCC
LFYSPNITPDKETGIGNWTEKDFIRALKDGRDPKGRNYFPVFPYVYFSKITDDDARALYA
EEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECHHHHHHHCCCHHHHHHHH
YFMSIPPVKLKNKSLPFPFGVPGARFALWGWNLLFFFPQENSIEYDPDKSPEWNRGRYIV
HHHHCCCEEECCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEE
DTLGHCSMCHTPMNIFGSAKNRYYLTGSFIDGYWAPNITKYGLESASHQEVADVFKAGEL
EHHCCHHHHCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHH
INKAGPVAGPMAEVNHNSLSHLTEEDRLAIATYLKTVESEEYLGVSPSDLPPSVARGRQV
HHHCCCCCCCHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
YLKACLICHKDNKMGAPVIGDSASWYTRLKNSGLTGLYRHAIYGYNQMPVKGACVTCSDN
HHHHHHHEECCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCC
DIISAVDYLLNASLTRSQWQDLASGGVKKYPASGKAVYNENCAVCHNEGKLGAPKIGDKV
CHHHHHHHHHCCCCCHHHHHHHHHCCCEECCCCCCEEECCCCEEEECCCCCCCCCCCCCC
TWKPLIAQNMDVLIENTIRGKNHLPNGGCNHCSTDEVIEAIKYMVSQSKTEGNYSLW
EECHHHHCCCHHEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]