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The map label for this gene is 52842966

Identifier: 52842966

GI number: 52842966

Start: 3116678

End: 3117769

Strand: Reverse

Name: 52842966

Synonym: lpg2767

Alternate gene names: NA

Gene position: 3117769-3116678 (Counterclockwise)

Preceding gene: 52842967

Following gene: 52842963

Centisome position: 91.76

GC content: 39.93

Gene sequence:

>1092_bases
ATGAAGCTATTCTCTTTTTTTCTTGTATTGATAAGTTCTGCTAGCTTAGGCCAGAGTTTACCATTACATCTCCTAAAGTA
TCCGTCCAAATTTTCGATAAATATTTATGCAGCTCCCGTTTCTGATGCGCGAGAAATGGCACTGGGCAGTAAAGATATAG
TTTTTGTAGGCTCAAGAAGTGCCGGGAAAGTGTATGCTGTTATTCCAGATAAAAAAAACTCTCATGGTACTCGAGTTTTA
ACCATAGCTTCTGGATTGAATATGCCAAATGGTGTTGCCTTTCATAAAGGCGCACTTTATGTCGCCGAGATTGGGCGGAT
TTTACGCTTTGATAATATTGAATCAAATCTGAATAATCCTCCTGAACCAGTTGTGGTTACTACAAAATTACCGAAAGAAA
AAGCTCATGGCTGGCGTTTTATTAGTTTTGGACCAGATGATAAGCTTTATATAGGAATTGGCGCCCCTTGCAATGTTTGT
TTAATGGAAGATCCGCGTTATGCTACTATTATGAGAATGAATACCTATGGGCAAGATCTCGAGATCTATGCTAGAGGAAT
ACGTAATACAGTGGGGTTTGATTGGGATCCCCTTCATCATAATCTTTGGTTTACAGACAATGGGCGTGACTGGCTAGGTG
ATAACTTACCCCCAGATGAGCTCAATGTAGCTCCGAGAAAGGGCATGGATTTTGGTTTTCCTTATTGCTATGGTAAAAGC
ACAGTAGATCCTGTTTATGGCAAAATACATTCTTGTTCCGAGTTTACTCCTGCTGTTTTTGAATTCCCAGCGCATGTTGC
TCCACTTGGTATGTCATTTTATACAGGCAAATTGTTCCCTTCCAATTATTGGGGACAAATTTTTATTAGTGAGCACGGTT
CCTGGAATCGTAGTCATAAGATCGGGTATCAAGTTACTACAGTAAAAATTAAGAATAATCACGTAACTGAGGTTAAGCCA
TTTATCAGCGGGTGGTTACAGGGGGAAAAAGCATGGGGAAGACCTGTTGATACGCTCGTTATGCCAGATGGGTCACTATT
AATCTCTGACGATTATGCTAATGTAATATATCGGGTTAGCTATCAGCAGTAA

Upstream 100 bases:

>100_bases
AACTCGTGGAAGGCATGAGCTTTTCGCGAGTTTTAACTGAGTGCTTGCAATTGGTATATATGACCGCATAAATTATAAGC
TACTAAAGTAGAGTTTAAGC

Downstream 100 bases:

>100_bases
ATGGAGCAGTTATTTTATTATAGGCGGGGATAAAGCCCCTACCTATTTCTTATCAGTATTAACGAATTAAATTTAAGAAT
TCCAAACGGCAGCTCGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKLFSFFLVLISSASLGQSLPLHLLKYPSKFSINIYAAPVSDAREMALGSKDIVFVGSRSAGKVYAVIPDKKNSHGTRVL
TIASGLNMPNGVAFHKGALYVAEIGRILRFDNIESNLNNPPEPVVVTTKLPKEKAHGWRFISFGPDDKLYIGIGAPCNVC
LMEDPRYATIMRMNTYGQDLEIYARGIRNTVGFDWDPLHHNLWFTDNGRDWLGDNLPPDELNVAPRKGMDFGFPYCYGKS
TVDPVYGKIHSCSEFTPAVFEFPAHVAPLGMSFYTGKLFPSNYWGQIFISEHGSWNRSHKIGYQVTTVKIKNNHVTEVKP
FISGWLQGEKAWGRPVDTLVMPDGSLLISDDYANVIYRVSYQQ

Sequences:

>Translated_363_residues
MKLFSFFLVLISSASLGQSLPLHLLKYPSKFSINIYAAPVSDAREMALGSKDIVFVGSRSAGKVYAVIPDKKNSHGTRVL
TIASGLNMPNGVAFHKGALYVAEIGRILRFDNIESNLNNPPEPVVVTTKLPKEKAHGWRFISFGPDDKLYIGIGAPCNVC
LMEDPRYATIMRMNTYGQDLEIYARGIRNTVGFDWDPLHHNLWFTDNGRDWLGDNLPPDELNVAPRKGMDFGFPYCYGKS
TVDPVYGKIHSCSEFTPAVFEFPAHVAPLGMSFYTGKLFPSNYWGQIFISEHGSWNRSHKIGYQVTTVKIKNNHVTEVKP
FISGWLQGEKAWGRPVDTLVMPDGSLLISDDYANVIYRVSYQQ
>Mature_363_residues
MKLFSFFLVLISSASLGQSLPLHLLKYPSKFSINIYAAPVSDAREMALGSKDIVFVGSRSAGKVYAVIPDKKNSHGTRVL
TIASGLNMPNGVAFHKGALYVAEIGRILRFDNIESNLNNPPEPVVVTTKLPKEKAHGWRFISFGPDDKLYIGIGAPCNVC
LMEDPRYATIMRMNTYGQDLEIYARGIRNTVGFDWDPLHHNLWFTDNGRDWLGDNLPPDELNVAPRKGMDFGFPYCYGKS
TVDPVYGKIHSCSEFTPAVFEFPAHVAPLGMSFYTGKLFPSNYWGQIFISEHGSWNRSHKIGYQVTTVKIKNNHVTEVKP
FISGWLQGEKAWGRPVDTLVMPDGSLLISDDYANVIYRVSYQQ

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 40639; Mature: 40639

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFSFFLVLISSASLGQSLPLHLLKYPSKFSINIYAAPVSDAREMALGSKDIVFVGSRS
CHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCHHHHHCCCCCEEEEECCC
AGKVYAVIPDKKNSHGTRVLTIASGLNMPNGVAFHKGALYVAEIGRILRFDNIESNLNNP
CCEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEECCCEEHHHHHHHEEECCCHHHCCCC
PEPVVVTTKLPKEKAHGWRFISFGPDDKLYIGIGAPCNVCLMEDPRYATIMRMNTYGQDL
CCCEEEEEECCHHHCCCEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCH
EIYARGIRNTVGFDWDPLHHNLWFTDNGRDWLGDNLPPDELNVAPRKGMDFGFPYCYGKS
HHHHHHHHHHCCCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC
TVDPVYGKIHSCSEFTPAVFEFPAHVAPLGMSFYTGKLFPSNYWGQIFISEHGSWNRSHK
CCCHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCC
IGYQVTTVKIKNNHVTEVKPFISGWLQGEKAWGRPVDTLVMPDGSLLISDDYANVIYRVS
CCEEEEEEEECCCCCEEHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEE
YQQ
ECC
>Mature Secondary Structure
MKLFSFFLVLISSASLGQSLPLHLLKYPSKFSINIYAAPVSDAREMALGSKDIVFVGSRS
CHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCHHHHHCCCCCEEEEECCC
AGKVYAVIPDKKNSHGTRVLTIASGLNMPNGVAFHKGALYVAEIGRILRFDNIESNLNNP
CCEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEECCCEEHHHHHHHEEECCCHHHCCCC
PEPVVVTTKLPKEKAHGWRFISFGPDDKLYIGIGAPCNVCLMEDPRYATIMRMNTYGQDL
CCCEEEEEECCHHHCCCEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCH
EIYARGIRNTVGFDWDPLHHNLWFTDNGRDWLGDNLPPDELNVAPRKGMDFGFPYCYGKS
HHHHHHHHHHCCCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC
TVDPVYGKIHSCSEFTPAVFEFPAHVAPLGMSFYTGKLFPSNYWGQIFISEHGSWNRSHK
CCCHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCC
IGYQVTTVKIKNNHVTEVKPFISGWLQGEKAWGRPVDTLVMPDGSLLISDDYANVIYRVS
CCEEEEEEEECCCCCEEHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEE
YQQ
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]