Click here to switch to the map view.

The map label for this gene is 52842671

Identifier: 52842671

GI number: 52842671

Start: 2776438

End: 2777157

Strand: Direct

Name: 52842671

Synonym: lpg2463

Alternate gene names: NA

Gene position: 2776438-2777157 (Clockwise)

Preceding gene: 52842670

Following gene: 52842673

Centisome position: 81.71

GC content: 38.06

Gene sequence:

>720_bases
ATGGTAGACTATCATTATTTCAAGAGTAAATTGAATCACTTTTATGGGCGCTATGTAGGATATAATCAACGCCCGGTTTT
TTTTGATATTGATCAAACTTTCCCAGAATTAAATCACATAACACGCCATTTTCCCGATATCAAAAGGGAATTCGAAAATG
TACAAGCGAATGTAAAAGAATTTCCACGCTACCACGACATAGATCCCGGAGAGTCTGCCATATCAAACACTACAGAAAAA
AACTGGAATGTTTTTATGCTGTATCTTCTTGGTTATCAACTCAAGGAAGCACGTTTATTATGCCCGGAACTTTGTAATTT
ATTGGAAGGAATACCCCATCTTATACAAGCTTTTTTCTCGATTTTAGAACCTGGAAAATCTATTCCCCTCCATGAAGGCC
CCTATATTGGCTATCTAAGATATCATTTAGGAATTCATGTTCCCCAAAACAATCCACCACAAATTTTAGTTAATAACCAA
ACTTATACCTGGAAAGAAGGAGAAGCAGTACTTTTTGATGACTCCTGGCCACATGAAGTAAGAAATACCAGTGATGATTA
TCGTGCCGTATTAATCATTGATGTCTTGCGCCCTATGCCCTTCTTGCCGCAACTGGTCAATCAATTTGTAACCCACGTCA
TTGCTCGATATTTTTATGGTCGCAAAGTAATGAAACGCGCGATGCAGTATGGTGGAGAAGTAAAGCCTTTGGCACTTTAA

Upstream 100 bases:

>100_bases
TCCATTTCTTCAAACTTCATTTTAAAATAGCTGATTTTCCCAAGGATAGTCGAACATTCGGCACCTGATTATTATCACAA
ATAAAATAAAGGAATAAGCA

Downstream 100 bases:

>100_bases
GTAAACAACGATTATTATCTTTCGAAAATCGTTTAAAATATTTATCAATCAATAAAAAAAGAAAAGTTGAACTTTAGGTT
CAACCCTTGTTGAATTAGCT

Product: peptide aspartate b-dioxygenase

Products: NA

Alternate protein names: Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Peptide-Aspartate Beta-Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Lipid A-Myristate Beta-Hydroxylase; Aspartyl-Asparaginyl Beta-Hydroxylase; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Lipopolysaccharide Biosynthetic Protein; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Peptide Aspartate B-Dioxygenase; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein; Aspartyl/Asparaginyl-Beta-Hydroxylase

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MVDYHYFKSKLNHFYGRYVGYNQRPVFFDIDQTFPELNHITRHFPDIKREFENVQANVKEFPRYHDIDPGESAISNTTEK
NWNVFMLYLLGYQLKEARLLCPELCNLLEGIPHLIQAFFSILEPGKSIPLHEGPYIGYLRYHLGIHVPQNNPPQILVNNQ
TYTWKEGEAVLFDDSWPHEVRNTSDDYRAVLIIDVLRPMPFLPQLVNQFVTHVIARYFYGRKVMKRAMQYGGEVKPLAL

Sequences:

>Translated_239_residues
MVDYHYFKSKLNHFYGRYVGYNQRPVFFDIDQTFPELNHITRHFPDIKREFENVQANVKEFPRYHDIDPGESAISNTTEK
NWNVFMLYLLGYQLKEARLLCPELCNLLEGIPHLIQAFFSILEPGKSIPLHEGPYIGYLRYHLGIHVPQNNPPQILVNNQ
TYTWKEGEAVLFDDSWPHEVRNTSDDYRAVLIIDVLRPMPFLPQLVNQFVTHVIARYFYGRKVMKRAMQYGGEVKPLAL
>Mature_239_residues
MVDYHYFKSKLNHFYGRYVGYNQRPVFFDIDQTFPELNHITRHFPDIKREFENVQANVKEFPRYHDIDPGESAISNTTEK
NWNVFMLYLLGYQLKEARLLCPELCNLLEGIPHLIQAFFSILEPGKSIPLHEGPYIGYLRYHLGIHVPQNNPPQILVNNQ
TYTWKEGEAVLFDDSWPHEVRNTSDDYRAVLIIDVLRPMPFLPQLVNQFVTHVIARYFYGRKVMKRAMQYGGEVKPLAL

Specific function: Unknown

COG id: COG3555

COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI14589866, Length=123, Percent_Identity=35.7723577235772, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI258613943, Length=123, Percent_Identity=35.7723577235772, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24654024, Length=122, Percent_Identity=34.4262295081967, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28177; Mature: 28177

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDYHYFKSKLNHFYGRYVGYNQRPVFFDIDQTFPELNHITRHFPDIKREFENVQANVKE
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
FPRYHDIDPGESAISNTTEKNWNVFMLYLLGYQLKEARLLCPELCNLLEGIPHLIQAFFS
CCCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILEPGKSIPLHEGPYIGYLRYHLGIHVPQNNPPQILVNNQTYTWKEGEAVLFDDSWPHEV
HHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEECCCEEEEECCCEEEECCCCCHHH
RNTSDDYRAVLIIDVLRPMPFLPQLVNQFVTHVIARYFYGRKVMKRAMQYGGEVKPLAL
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVDYHYFKSKLNHFYGRYVGYNQRPVFFDIDQTFPELNHITRHFPDIKREFENVQANVKE
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
FPRYHDIDPGESAISNTTEKNWNVFMLYLLGYQLKEARLLCPELCNLLEGIPHLIQAFFS
CCCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILEPGKSIPLHEGPYIGYLRYHLGIHVPQNNPPQILVNNQTYTWKEGEAVLFDDSWPHEV
HHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEECCCEEEEECCCEEEECCCCCHHH
RNTSDDYRAVLIIDVLRPMPFLPQLVNQFVTHVIARYFYGRKVMKRAMQYGGEVKPLAL
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA