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The map label for this gene is 52842608

Identifier: 52842608

GI number: 52842608

Start: 2709638

End: 2710984

Strand: Reverse

Name: 52842608

Synonym: lpg2399

Alternate gene names: NA

Gene position: 2710984-2709638 (Counterclockwise)

Preceding gene: 52842611

Following gene: 52842607

Centisome position: 79.79

GC content: 41.35

Gene sequence:

>1347_bases
ATGAAAAAATGGATTATCAGTGTGTTGCTGTTAGTAGTCATTGTCTTATGCTTCTACCCCATTATTGGCATGATGGCCTT
AAGCACGGTGAAAAAAAACGTCGATAATATTCCCAGGAATCCCTTCCTGACTTGGCAATTAAAAGATAATCACCGTGGAT
GGTTCTGCTCCACTGCCGTTTTGAATTTACTTGTTGATTTGCCAGCTCAGGAAAATAAAGACGCACAGGGTAATGTTAAA
GTGCAGCCAGCGCTTCATTTGAGTCTCGATTTCCCAATCGTCATACACCATGGTCCTTTCATCATGACCAATAATGGCTT
GCATTTTGGTCTCGCCTGGGTCACAACCAAGCCGGAAACCCATTATGGGGCTTTGATCAACTATTTAAATCAAACCGTTG
TCAGCTATAGTTTGCCCTCAATTAATATGCAAGGCACGAACAATGGTGATCAAGGCAACTTTGTTTTTGTCTGGCAAGGC
TTAAGTGCAAAGCTCAAAGTCAATCCCAAGGTTGATAAGGCCTCTGGTCATGTGACTATGTACGGTATGAGTACGAAAGT
GCAAGAAACCGATGTCAGGATTGGTAAAGTCAAAATCAATTTTGCATTGAATCGCTACATGGACGATTTATGGCTTGGTG
ATTCATCTATCTTGCTGTCTTCTGTTTCTACCATCACTAATTCACAGCCAGTGTTTGATTTGCAAGATCTGAGTATGGAT
GCGTGGGCTGGAATCAACAACAATTTACTGGATTTTAATTTGCAATTATCCCTGAATAAATTTCTAATGAATAATAACAG
CTATGGTCCTGGCCAATTAAAAATCGAGCTTAAAAATCTGGATCCTAAAGCGATGGCCAAGCTCAATCAATTGAACTATG
ACTATCCTTCCAATCAAATCGCGATCCTGGCTGAAATTTTTAATCTGCTTTCCAAAGGTGCGACACTCAATCTGAATCAA
GAGCTGGATACGCCACAGGGGCATTTGTCCAGTTCGTTGAACCTGGCTCTAACCAAGAGTTCATTCAGCAATCCTGGGGA
TCTGTTGCAAAATCTGAAAGGCAATGGTCAGTTTAAAGCGCCAATCAAACTGGTCAAGCAGCTGTTATTTGAATCAATCA
AATCAAAAACAGCTACACCAGCAGCGGATATGTCTCAATCTCAGGTTACAGAGCCGCTGGTTGATGTCGATGCTGAAGCC
CATAAACAAACGGAAGAAATCTTGCAAAAATGGGTGAATAAAGGCATCTTAAAGGTTGAAGGCGATTACTATCAGGCCTC
ATTTACTCTGGAAAACACCCAATTTACAGTGAATGGGCAGCCATTTGATCCAGCGTTATTGAATTAG

Upstream 100 bases:

>100_bases
CTCGCTCAAGTATTAAAGGTTCTTTCAGATAGATGGGCTATTTTACAATCAGCTTTTTCTGGTCTAAATATTAATTACTA
AGGATTAATGTTGGACAGTC

Downstream 100 bases:

>100_bases
ATTAGCGGTTGGGCAATTTGCTCAACCTGCACTGATGAGATGATCTTCTATGTCAATCACAAGCAAATCCAGGCGATGAA
AACTGTGGTAGAATACCCAC

Product: virulence protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MKKWIISVLLLVVIVLCFYPIIGMMALSTVKKNVDNIPRNPFLTWQLKDNHRGWFCSTAVLNLLVDLPAQENKDAQGNVK
VQPALHLSLDFPIVIHHGPFIMTNNGLHFGLAWVTTKPETHYGALINYLNQTVVSYSLPSINMQGTNNGDQGNFVFVWQG
LSAKLKVNPKVDKASGHVTMYGMSTKVQETDVRIGKVKINFALNRYMDDLWLGDSSILLSSVSTITNSQPVFDLQDLSMD
AWAGINNNLLDFNLQLSLNKFLMNNNSYGPGQLKIELKNLDPKAMAKLNQLNYDYPSNQIAILAEIFNLLSKGATLNLNQ
ELDTPQGHLSSSLNLALTKSSFSNPGDLLQNLKGNGQFKAPIKLVKQLLFESIKSKTATPAADMSQSQVTEPLVDVDAEA
HKQTEEILQKWVNKGILKVEGDYYQASFTLENTQFTVNGQPFDPALLN

Sequences:

>Translated_448_residues
MKKWIISVLLLVVIVLCFYPIIGMMALSTVKKNVDNIPRNPFLTWQLKDNHRGWFCSTAVLNLLVDLPAQENKDAQGNVK
VQPALHLSLDFPIVIHHGPFIMTNNGLHFGLAWVTTKPETHYGALINYLNQTVVSYSLPSINMQGTNNGDQGNFVFVWQG
LSAKLKVNPKVDKASGHVTMYGMSTKVQETDVRIGKVKINFALNRYMDDLWLGDSSILLSSVSTITNSQPVFDLQDLSMD
AWAGINNNLLDFNLQLSLNKFLMNNNSYGPGQLKIELKNLDPKAMAKLNQLNYDYPSNQIAILAEIFNLLSKGATLNLNQ
ELDTPQGHLSSSLNLALTKSSFSNPGDLLQNLKGNGQFKAPIKLVKQLLFESIKSKTATPAADMSQSQVTEPLVDVDAEA
HKQTEEILQKWVNKGILKVEGDYYQASFTLENTQFTVNGQPFDPALLN
>Mature_448_residues
MKKWIISVLLLVVIVLCFYPIIGMMALSTVKKNVDNIPRNPFLTWQLKDNHRGWFCSTAVLNLLVDLPAQENKDAQGNVK
VQPALHLSLDFPIVIHHGPFIMTNNGLHFGLAWVTTKPETHYGALINYLNQTVVSYSLPSINMQGTNNGDQGNFVFVWQG
LSAKLKVNPKVDKASGHVTMYGMSTKVQETDVRIGKVKINFALNRYMDDLWLGDSSILLSSVSTITNSQPVFDLQDLSMD
AWAGINNNLLDFNLQLSLNKFLMNNNSYGPGQLKIELKNLDPKAMAKLNQLNYDYPSNQIAILAEIFNLLSKGATLNLNQ
ELDTPQGHLSSSLNLALTKSSFSNPGDLLQNLKGNGQFKAPIKLVKQLLFESIKSKTATPAADMSQSQVTEPLVDVDAEA
HKQTEEILQKWVNKGILKVEGDYYQASFTLENTQFTVNGQPFDPALLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49809; Mature: 49809

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWIISVLLLVVIVLCFYPIIGMMALSTVKKNVDNIPRNPFLTWQLKDNHRGWFCSTAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEHHHHH
LNLLVDLPAQENKDAQGNVKVQPALHLSLDFPIVIHHGPFIMTNNGLHFGLAWVTTKPET
HHHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEEECCCEEEECCCCEEEEEEEEECCCC
HYGALINYLNQTVVSYSLPSINMQGTNNGDQGNFVFVWQGLSAKLKVNPKVDKASGHVTM
HHHHHHHHHHHHHHEEECCCEEECCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCEEE
YGMSTKVQETDVRIGKVKINFALNRYMDDLWLGDSSILLSSVSTITNSQPVFDLQDLSMD
EECCCEEECCCEEEEEEEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEHHHCCHH
AWAGINNNLLDFNLQLSLNKFLMNNNSYGPGQLKIELKNLDPKAMAKLNQLNYDYPSNQI
HHCCCCCCEEEEEEEEEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCHH
AILAEIFNLLSKGATLNLNQELDTPQGHLSSSLNLALTKSSFSNPGDLLQNLKGNGQFKA
HHHHHHHHHHHCCCEEEECCCCCCCCCHHCCCEEEEEECCCCCCHHHHHHHCCCCCCEEC
PIKLVKQLLFESIKSKTATPAADMSQSQVTEPLVDVDAEAHKQTEEILQKWVNKGILKVE
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCEEEEE
GDYYQASFTLENTQFTVNGQPFDPALLN
CCEEEEEEEEECEEEEECCCCCCHHCCC
>Mature Secondary Structure
MKKWIISVLLLVVIVLCFYPIIGMMALSTVKKNVDNIPRNPFLTWQLKDNHRGWFCSTAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEHHHHH
LNLLVDLPAQENKDAQGNVKVQPALHLSLDFPIVIHHGPFIMTNNGLHFGLAWVTTKPET
HHHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEEECCCEEEECCCCEEEEEEEEECCCC
HYGALINYLNQTVVSYSLPSINMQGTNNGDQGNFVFVWQGLSAKLKVNPKVDKASGHVTM
HHHHHHHHHHHHHHEEECCCEEECCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCEEE
YGMSTKVQETDVRIGKVKINFALNRYMDDLWLGDSSILLSSVSTITNSQPVFDLQDLSMD
EECCCEEECCCEEEEEEEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEHHHCCHH
AWAGINNNLLDFNLQLSLNKFLMNNNSYGPGQLKIELKNLDPKAMAKLNQLNYDYPSNQI
HHCCCCCCEEEEEEEEEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCHH
AILAEIFNLLSKGATLNLNQELDTPQGHLSSSLNLALTKSSFSNPGDLLQNLKGNGQFKA
HHHHHHHHHHHCCCEEEECCCCCCCCCHHCCCEEEEEECCCCCCHHHHHHHCCCCCCEEC
PIKLVKQLLFESIKSKTATPAADMSQSQVTEPLVDVDAEAHKQTEEILQKWVNKGILKVE
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCEEEEE
GDYYQASFTLENTQFTVNGQPFDPALLN
CCEEEEEEEEECEEEEECCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA