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The map label for this gene is sdbC

Identifier: 52842600

GI number: 52842600

Start: 2702256

End: 2703560

Strand: Reverse

Name: sdbC

Synonym: lpg2391

Alternate gene names: NA

Gene position: 2703560-2702256 (Counterclockwise)

Preceding gene: 52842602

Following gene: 52842599

Centisome position: 79.57

GC content: 40.84

Gene sequence:

>1305_bases
ATGCCGAATTCAAGTATACAAATCTGGTTGCAAAGACAAATAGCTTTAAGAACCTTTCCTCCCAATAGAGAGGACTGGTA
TGTCAAAAATGGTTTCGGTAATTCAGAGATGTCACTTGAAGAACGTTTTGCCTCTTTTGTAGAAGCAATACGTCAAGAGG
ATTCTCCCTACCATGAACAATTATCCGGTATAGACTTTCAGCGCTTTGAAATCGAGGTGACTTTAGCCAACCAAAAAACC
TGTATGACCGAGGTGATAGGCTTTCAGAATAATTCTAATCAATCAAGCTCCACACCTAATGAGAAGTTCAAAGCTGTCGG
GAAGGGAAAACATGTGATTTATTTCACTGGAATAGGAACACAATATCAAGATTGCCTGATTGATATAGCAAAAGCTGTTC
AAATAACGGGAGCGCATTATTACGCCTTTGAATACCCGGGCATGAGAAAACTGGGCGGTGAAGTGTTAGAAGTCAATGAT
ATGGTTAACACTGGAATAGCGCTGGCCAATACCTTGCTTGAAAAAGGCATATCAATTGATGATATCCTTTTTCAAGGCGA
CTCCTTTGGTGCTGCAGTGGCAAAAAAAGTCAGTGATCAATTCAAACTGCAATCCAATGTAACAGTAAGATGCATTCTGA
ATAATACCTTTTCCACTTTTCAAGCTGCTGTAGAAGGAAATCTGGGTGCGTTCTCTACTCTGCGTTATACAGTTCGTCCT
CTGCTTCGTTACACGGGTTGGGATATTCGTCCAGGAGAGGGCTATGGCCAGGACACACCCTACCAAATTCATGTCAATCA
TACAGGTGATCTTACCTTAGGGGCAGGGCATGCAACGCTTGCAGAAAGCATTGAATCCAATTCTCAACTTGAACATTTCG
TTGATCCCTGTCCTGAAGAGTATCGTATTAAAAGAGATATCTATAAACAGTGGCATTGGGCCTCATTAAGCGAACAAGGA
ATAACATTTCTTGAGACCAAATATGGCAGAAACAGTGATGGACAACTGGACACGCATTTGGCTGATTTGTATTTGCTAAA
GTATGATACAGGTCTGGGGGTTTATGAATCATTTATTTGTAAATACCTCGAAGACAGTAATGACTATATTGCAAGTCACC
CGCAAAAACTTTCTCTTGACGAATTACCCAGACCTCTTGAGTCTGAAACAGTTTCACTAAGACAATTGATTGTGTCTGTG
TTACCATCAAGACCTAGTATAGCTGGTTTCTTTAGTCGTAGTACACCTGTCATAGAGGAGGTGGAGACAGAGAAGCAAGA
GCAGAAATCAATTGAGTTAAAGTAG

Upstream 100 bases:

>100_bases
GTGCTGAAAATAAGAATTATCTCTAATAAAGATGCGCAAAGAAATGTTGACTCATTAGCAAATTGTATGCACACTTATTG
ATCAAAAAAAAGGGGGTGTT

Downstream 100 bases:

>100_bases
GCTGTACCACTTACCCGTAAAACAAAAACAACAGATTGGATATGGATAAAAGGATTATTGCGGCAGCCTCTTTTGGTACC
TTGTTTGAAATGTACGACTA

Product: SdbC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MPNSSIQIWLQRQIALRTFPPNREDWYVKNGFGNSEMSLEERFASFVEAIRQEDSPYHEQLSGIDFQRFEIEVTLANQKT
CMTEVIGFQNNSNQSSSTPNEKFKAVGKGKHVIYFTGIGTQYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVND
MVNTGIALANTLLEKGISIDDILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRP
LLRYTGWDIRPGEGYGQDTPYQIHVNHTGDLTLGAGHATLAESIESNSQLEHFVDPCPEEYRIKRDIYKQWHWASLSEQG
ITFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFICKYLEDSNDYIASHPQKLSLDELPRPLESETVSLRQLIVSV
LPSRPSIAGFFSRSTPVIEEVETEKQEQKSIELK

Sequences:

>Translated_434_residues
MPNSSIQIWLQRQIALRTFPPNREDWYVKNGFGNSEMSLEERFASFVEAIRQEDSPYHEQLSGIDFQRFEIEVTLANQKT
CMTEVIGFQNNSNQSSSTPNEKFKAVGKGKHVIYFTGIGTQYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVND
MVNTGIALANTLLEKGISIDDILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRP
LLRYTGWDIRPGEGYGQDTPYQIHVNHTGDLTLGAGHATLAESIESNSQLEHFVDPCPEEYRIKRDIYKQWHWASLSEQG
ITFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFICKYLEDSNDYIASHPQKLSLDELPRPLESETVSLRQLIVSV
LPSRPSIAGFFSRSTPVIEEVETEKQEQKSIELK
>Mature_433_residues
PNSSIQIWLQRQIALRTFPPNREDWYVKNGFGNSEMSLEERFASFVEAIRQEDSPYHEQLSGIDFQRFEIEVTLANQKTC
MTEVIGFQNNSNQSSSTPNEKFKAVGKGKHVIYFTGIGTQYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVNDM
VNTGIALANTLLEKGISIDDILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRPL
LRYTGWDIRPGEGYGQDTPYQIHVNHTGDLTLGAGHATLAESIESNSQLEHFVDPCPEEYRIKRDIYKQWHWASLSEQGI
TFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFICKYLEDSNDYIASHPQKLSLDELPRPLESETVSLRQLIVSVL
PSRPSIAGFFSRSTPVIEEVETEKQEQKSIELK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48984; Mature: 48853

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNSSIQIWLQRQIALRTFPPNREDWYVKNGFGNSEMSLEERFASFVEAIRQEDSPYHEQ
CCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
LSGIDFQRFEIEVTLANQKTCMTEVIGFQNNSNQSSSTPNEKFKAVGKGKHVIYFTGIGT
HCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCC
QYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVNDMVNTGIALANTLLEKGISID
HHHHHHHHHHHHHEECCCEEEEEECCCHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCHH
DILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRP
HEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH
LLRYTGWDIRPGEGYGQDTPYQIHVNHTGDLTLGAGHATLAESIESNSQLEHFVDPCPEE
HHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHCCCHHHHHHCCCCHH
YRIKRDIYKQWHWASLSEQGITFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFIC
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHEEEEEEEECCCCHHHHHHHH
KYLEDSNDYIASHPQKLSLDELPRPLESETVSLRQLIVSVLPSRPSIAGFFSRSTPVIEE
HHHHCCCCHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHH
VETEKQEQKSIELK
HHHHHHHHHCCCCC
>Mature Secondary Structure 
PNSSIQIWLQRQIALRTFPPNREDWYVKNGFGNSEMSLEERFASFVEAIRQEDSPYHEQ
CCCCEEEEEEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
LSGIDFQRFEIEVTLANQKTCMTEVIGFQNNSNQSSSTPNEKFKAVGKGKHVIYFTGIGT
HCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCC
QYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVNDMVNTGIALANTLLEKGISID
HHHHHHHHHHHHHEECCCEEEEEECCCHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCHH
DILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRP
HEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH
LLRYTGWDIRPGEGYGQDTPYQIHVNHTGDLTLGAGHATLAESIESNSQLEHFVDPCPEE
HHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHCCCHHHHHHCCCCHH
YRIKRDIYKQWHWASLSEQGITFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFIC
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHEEEEEEEECCCCHHHHHHHH
KYLEDSNDYIASHPQKLSLDELPRPLESETVSLRQLIVSVLPSRPSIAGFFSRSTPVIEE
HHHHCCCCHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHH
VETEKQEQKSIELK
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA