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The map label for this gene is yibN [H]

Identifier: 52842516

GI number: 52842516

Start: 2607641

End: 2608060

Strand: Direct

Name: yibN [H]

Synonym: lpg2306

Alternate gene names: 52842516

Gene position: 2607641-2608060 (Clockwise)

Preceding gene: 52842515

Following gene: 52842517

Centisome position: 76.75

GC content: 38.1

Gene sequence:

>420_bases
ATGGAAAAATTAGGTCAGTTCATCATCAATCATTGGCAACTCTGGCTCGCCTTTGTTGTGGTTGTATTTTTAATTTTCAT
TAATGAAATACTCTCTCAAAGAAAGAAAGCCAAAGAAGTTTCACCGCAATCCCTGGTTGATTTAATGAACAATGGAAATG
CCATCGTAATCGACATACGCGACAAAGAATCATTCAAAAATGGCCATATCATTAATTCAATGAACGTAAATCCTGATGAT
TTTGAACAACAAAAAATGAGCAAGTACAAAGATAAACCCATTATCCTGGTCTGCGCACGAGGCTTACAATCTCCAACCCT
AGCCATGAAAATCCGCAATCAAGGTTACCAACCCCTGGTTTTGAGTGGAGGAATTCAAGCCTGGCAAAATGCTGATCTTC
CTTTAGTGAAGGGTAAATAA

Upstream 100 bases:

>100_bases
AGAAAAGGATGAACAGGGCAATTACTAGTAACACTTTACTTGCGTTAAAGCAGTAATCTTAGGATAATTCGTCAAATTAA
AAAATATCTTGAGTACAGCT

Downstream 100 bases:

>100_bases
ACAGATGAATGAAGTCATACTCTACACTACAGGCTATTGTCCTTATTGCATCAAAGCAAAAGAACTACTAGATAGAAAAA
AGGTTATCTATACCGAAATC

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MEKLGQFIINHWQLWLAFVVVVFLIFINEILSQRKKAKEVSPQSLVDLMNNGNAIVIDIRDKESFKNGHIINSMNVNPDD
FEQQKMSKYKDKPIILVCARGLQSPTLAMKIRNQGYQPLVLSGGIQAWQNADLPLVKGK

Sequences:

>Translated_139_residues
MEKLGQFIINHWQLWLAFVVVVFLIFINEILSQRKKAKEVSPQSLVDLMNNGNAIVIDIRDKESFKNGHIINSMNVNPDD
FEQQKMSKYKDKPIILVCARGLQSPTLAMKIRNQGYQPLVLSGGIQAWQNADLPLVKGK
>Mature_139_residues
MEKLGQFIINHWQLWLAFVVVVFLIFINEILSQRKKAKEVSPQSLVDLMNNGNAIVIDIRDKESFKNGHIINSMNVNPDD
FEQQKMSKYKDKPIILVCARGLQSPTLAMKIRNQGYQPLVLSGGIQAWQNADLPLVKGK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=143, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15820; Mature: 15820

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLGQFIINHWQLWLAFVVVVFLIFINEILSQRKKAKEVSPQSLVDLMNNGNAIVIDIR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEC
DKESFKNGHIINSMNVNPDDFEQQKMSKYKDKPIILVCARGLQSPTLAMKIRNQGYQPLV
CCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCEEE
LSGGIQAWQNADLPLVKGK
EECCCHHHCCCCCCEECCC
>Mature Secondary Structure
MEKLGQFIINHWQLWLAFVVVVFLIFINEILSQRKKAKEVSPQSLVDLMNNGNAIVIDIR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEC
DKESFKNGHIINSMNVNPDDFEQQKMSKYKDKPIILVCARGLQSPTLAMKIRNQGYQPLV
CCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCEEE
LSGGIQAWQNADLPLVKGK
EECCCHHHCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]