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The map label for this gene is 52842451

Identifier: 52842451

GI number: 52842451

Start: 2532943

End: 2533329

Strand: Reverse

Name: 52842451

Synonym: lpg2238

Alternate gene names: NA

Gene position: 2533329-2532943 (Counterclockwise)

Preceding gene: 52842458

Following gene: 52842450

Centisome position: 74.56

GC content: 39.53

Gene sequence:

>387_bases
ATGTATACTATAATTGTTTGCTTGTTTATCGCTATATTGCTACCTTATCTGGCAAAAGTTCCTGTAGCTTATGCCATGCA
TAAGGCGGGTGGCTATAATAATCGTTATCCCAGAGAGCAACAAGCTCGCTTGCAAGGGTTTGGCGCAAGAGCTCTGGCAG
CGCATCAAAATGCTTTTGAGTCTTTACTGATATTTGCAACAGCTTCATTAACTGCATTGGCCACTAATTCAGTCACTTTA
ATGACCCAATATTTCGCTATCGCCTATATTATTTCCCGGCTTTTTTATCATTTGTTTTATTTGCTGAATTGGTCTTCCCT
GCGCTCCACTGTATGGTTTTTGGGTGTAATATGCTGTCTCTCTATTTTATGGCTTAGTATTCCTTAA

Upstream 100 bases:

>100_bases
AAGTGGACTACAATTAAATTTGCCCGATTGAGTTGAGAGAACATCTTGGTTAATATGTCATTTAGTTATTTTTAATATAT
GCCTGAGATACTCTATAACC

Downstream 100 bases:

>100_bases
AAATTTTGGCAAGGTATGTCTTTATTCAAAAAAATTCACCGAGTGATGATTTAAGGCGCAAAAATCCATCAATTTAGCAT
CTAATTGGTTATAGACACTT

Product: transmembrane protein

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MYTIIVCLFIAILLPYLAKVPVAYAMHKAGGYNNRYPREQQARLQGFGARALAAHQNAFESLLIFATASLTALATNSVTL
MTQYFAIAYIISRLFYHLFYLLNWSSLRSTVWFLGVICCLSILWLSIP

Sequences:

>Translated_128_residues
MYTIIVCLFIAILLPYLAKVPVAYAMHKAGGYNNRYPREQQARLQGFGARALAAHQNAFESLLIFATASLTALATNSVTL
MTQYFAIAYIISRLFYHLFYLLNWSSLRSTVWFLGVICCLSILWLSIP
>Mature_128_residues
MYTIIVCLFIAILLPYLAKVPVAYAMHKAGGYNNRYPREQQARLQGFGARALAAHQNAFESLLIFATASLTALATNSVTL
MTQYFAIAYIISRLFYHLFYLLNWSSLRSTVWFLGVICCLSILWLSIP

Specific function: Unknown

COG id: COG3686

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14476; Mature: 14476

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTIIVCLFIAILLPYLAKVPVAYAMHKAGGYNNRYPREQQARLQGFGARALAAHQNAFE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
SLLIFATASLTALATNSVTLMTQYFAIAYIISRLFYHLFYLLNWSSLRSTVWFLGVICCL
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILWLSIP
HHHHHCCC
>Mature Secondary Structure
MYTIIVCLFIAILLPYLAKVPVAYAMHKAGGYNNRYPREQQARLQGFGARALAAHQNAFE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
SLLIFATASLTALATNSVTLMTQYFAIAYIISRLFYHLFYLLNWSSLRSTVWFLGVICCL
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILWLSIP
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA