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The map label for this gene is yvdB [H]

Identifier: 52842406

GI number: 52842406

Start: 2475808

End: 2477361

Strand: Direct

Name: yvdB [H]

Synonym: lpg2193

Alternate gene names: 52842406

Gene position: 2475808-2477361 (Clockwise)

Preceding gene: 52842405

Following gene: 52842407

Centisome position: 72.87

GC content: 37.32

Gene sequence:

>1554_bases
CTGGAGTTCAAGCGGATAACTAAATACGAGGCCATTATGAAGCATGGTTTATTTGCTCATCTCAAACACGACTTACCAGC
ATCCATTGTTGTTTTTTTTGTGGCTTTACCTTTGTGTCTGGGCATAGCATTAGCTTCACATGTTCCTCTTTTTTCAGGAA
TTATTGCTGGTGTTATTGGTGGAGTAGTCGTAGGGTTTATCAGCGGCTCAGCGCTTGGAGTGAGCGGGCCAGCAGCAGGA
CTTGTAGCAATAGTCATTTCCTCTGTAGAGACATTAGGCAGCTGGGAAGCTTTTTTGTTAGCTGGGGTAATTGCTGGAAT
ATTGCAATTAATTGCAGGTTTTCTGCGAGGTGGAATTATTGCTTACTATTTTCCCTCCTCCGTAATCAAAGGCATGCTCA
CGGGAATCGGTATTATTATTGTTTTAAAACAAATTCCTCATTTATTAGGGCACGACGTCACGCCACTTCTATTGAGTATG
TCGGATGGTGAATTGGATATTAATGACATCAGAGAAGCATTGGATGATATTAATCCTGAGGTTGTTATTATCAGCATTGT
TTCTCTTTTAACCCTGATTTTTTGGGAGAAGCTGGTAAAAAAACACAAACTGTTTGAAATGATACAAGGCCCCCTTGTCG
TGGTCATCCTGGGAATTGCTTTGAACTTGTTTTATGAACACCGATTAACCAGTTTTTCCCTTGATCCATCGGAACTGGTT
CAACTGCCGAAATTTAACAAAGCATCCGAATTATTTAATTATTTAACACTGCCAGATTTTTCGCTAATTACTCATTTGAA
AATATACAAAATAGCAATCCTCATTGCCCTAATCGCCAGTTTGGAAACACTGCTCTGCGTAGAAGCCGTTGATAAACTGG
ATCCCTACAAGAGAGTAACGTCTACAGACCGTGAATTAAAAGCCCAGGGAGTAGGAAATATTCTCTCTTGCTTGATTGGC
GGACTACCGATTACACAGGTTATTGTGCGTAGTAGTGCCAATGTCGCTTTTGGAGCAAAATCCAAGCTGTCCGCTATTTT
ACATGGCTTATTACTTTTTATTTGTGTCATCAGCATACCAGAAATACTCAATGAAATTCCACTTGCATCATTAGCTAGTA
TTTTGATTATTATAGGCTATAAGTTAGCCAAGCCGGCTTTATTCAAACAAATGTATAAAATGGGATGGGAACAGTTTGTA
CCCTTTATGATTACAATTATTGGGATTATTTTTAGCGATTTACTTTTCGGAATTACACTAGGATTTTCACTAGCTATTTT
TATTATCTTGCGACATCACTTTCTTAATTCACATGATATGATTAAAACCCGTGGCAAAAACAAAACCCAATACTGCCTTA
AACTGGCAGAAGAGGTAACTTTTTTAAACAAAGGAAGTATAATCAACGAATTAAAAAATATACCAGAAGGTGCCGAGGTA
GTTATTGATGGGTCTCGCTCTAAAATTATTGATCATGATATTAAAGAAGTCATTCAAAATTTCATATTGAATTCAAAAAC
CAAAAATATTCAAGTTAAATTAATAGGAATTTAA

Upstream 100 bases:

>100_bases
GTTTCTGTACATCTTTGCAACTTATTAAATTAAAATGATATTTTACTATAAAATTATAAGATAAACTGTATTTTTATTTA
AGAAAAGCACTTTTTCTTTC

Downstream 100 bases:

>100_bases
ATCATGTGGACTTTAACCAAAGAACAACAACAAGCAATTACTCCAGAGAAAGCTATTGAGCTCTTAAAAGAAGGTAACAA
GCGTTTCGTTAATAATCTTA

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MEFKRITKYEAIMKHGLFAHLKHDLPASIVVFFVALPLCLGIALASHVPLFSGIIAGVIGGVVVGFISGSALGVSGPAAG
LVAIVISSVETLGSWEAFLLAGVIAGILQLIAGFLRGGIIAYYFPSSVIKGMLTGIGIIIVLKQIPHLLGHDVTPLLLSM
SDGELDINDIREALDDINPEVVIISIVSLLTLIFWEKLVKKHKLFEMIQGPLVVVILGIALNLFYEHRLTSFSLDPSELV
QLPKFNKASELFNYLTLPDFSLITHLKIYKIAILIALIASLETLLCVEAVDKLDPYKRVTSTDRELKAQGVGNILSCLIG
GLPITQVIVRSSANVAFGAKSKLSAILHGLLLFICVISIPEILNEIPLASLASILIIIGYKLAKPALFKQMYKMGWEQFV
PFMITIIGIIFSDLLFGITLGFSLAIFIILRHHFLNSHDMIKTRGKNKTQYCLKLAEEVTFLNKGSIINELKNIPEGAEV
VIDGSRSKIIDHDIKEVIQNFILNSKTKNIQVKLIGI

Sequences:

>Translated_517_residues
MEFKRITKYEAIMKHGLFAHLKHDLPASIVVFFVALPLCLGIALASHVPLFSGIIAGVIGGVVVGFISGSALGVSGPAAG
LVAIVISSVETLGSWEAFLLAGVIAGILQLIAGFLRGGIIAYYFPSSVIKGMLTGIGIIIVLKQIPHLLGHDVTPLLLSM
SDGELDINDIREALDDINPEVVIISIVSLLTLIFWEKLVKKHKLFEMIQGPLVVVILGIALNLFYEHRLTSFSLDPSELV
QLPKFNKASELFNYLTLPDFSLITHLKIYKIAILIALIASLETLLCVEAVDKLDPYKRVTSTDRELKAQGVGNILSCLIG
GLPITQVIVRSSANVAFGAKSKLSAILHGLLLFICVISIPEILNEIPLASLASILIIIGYKLAKPALFKQMYKMGWEQFV
PFMITIIGIIFSDLLFGITLGFSLAIFIILRHHFLNSHDMIKTRGKNKTQYCLKLAEEVTFLNKGSIINELKNIPEGAEV
VIDGSRSKIIDHDIKEVIQNFILNSKTKNIQVKLIGI
>Mature_517_residues
MEFKRITKYEAIMKHGLFAHLKHDLPASIVVFFVALPLCLGIALASHVPLFSGIIAGVIGGVVVGFISGSALGVSGPAAG
LVAIVISSVETLGSWEAFLLAGVIAGILQLIAGFLRGGIIAYYFPSSVIKGMLTGIGIIIVLKQIPHLLGHDVTPLLLSM
SDGELDINDIREALDDINPEVVIISIVSLLTLIFWEKLVKKHKLFEMIQGPLVVVILGIALNLFYEHRLTSFSLDPSELV
QLPKFNKASELFNYLTLPDFSLITHLKIYKIAILIALIASLETLLCVEAVDKLDPYKRVTSTDRELKAQGVGNILSCLIG
GLPITQVIVRSSANVAFGAKSKLSAILHGLLLFICVISIPEILNEIPLASLASILIIIGYKLAKPALFKQMYKMGWEQFV
PFMITIIGIIFSDLLFGITLGFSLAIFIILRHHFLNSHDMIKTRGKNKTQYCLKLAEEVTFLNKGSIINELKNIPEGAEV
VIDGSRSKIIDHDIKEVIQNFILNSKTKNIQVKLIGI

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Escherichia coli, GI87081859, Length=428, Percent_Identity=27.803738317757, Blast_Score=116, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17551690, Length=406, Percent_Identity=23.6453201970443, Blast_Score=69, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6325260, Length=571, Percent_Identity=23.4676007005254, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 56441; Mature: 56441

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKRITKYEAIMKHGLFAHLKHDLPASIVVFFVALPLCLGIALASHVPLFSGIIAGVIG
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
GVVVGFISGSALGVSGPAAGLVAIVISSVETLGSWEAFLLAGVIAGILQLIAGFLRGGII
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEE
AYYFPSSVIKGMLTGIGIIIVLKQIPHLLGHDVTPLLLSMSDGELDINDIREALDDINPE
EEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCHHHHHHHHHCCCCC
VVIISIVSLLTLIFWEKLVKKHKLFEMIQGPLVVVILGIALNLFYEHRLTSFSLDPSELV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QLPKFNKASELFNYLTLPDFSLITHLKIYKIAILIALIASLETLLCVEAVDKLDPYKRVT
HCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
STDRELKAQGVGNILSCLIGGLPITQVIVRSSANVAFGAKSKLSAILHGLLLFICVISIP
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EILNEIPLASLASILIIIGYKLAKPALFKQMYKMGWEQFVPFMITIIGIIFSDLLFGITL
HHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
GFSLAIFIILRHHFLNSHDMIKTRGKNKTQYCLKLAEEVTFLNKGSIINELKNIPEGAEV
HHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEE
VIDGSRSKIIDHDIKEVIQNFILNSKTKNIQVKLIGI
EEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
>Mature Secondary Structure
MEFKRITKYEAIMKHGLFAHLKHDLPASIVVFFVALPLCLGIALASHVPLFSGIIAGVIG
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
GVVVGFISGSALGVSGPAAGLVAIVISSVETLGSWEAFLLAGVIAGILQLIAGFLRGGII
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEE
AYYFPSSVIKGMLTGIGIIIVLKQIPHLLGHDVTPLLLSMSDGELDINDIREALDDINPE
EEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCHHHHHHHHHCCCCC
VVIISIVSLLTLIFWEKLVKKHKLFEMIQGPLVVVILGIALNLFYEHRLTSFSLDPSELV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QLPKFNKASELFNYLTLPDFSLITHLKIYKIAILIALIASLETLLCVEAVDKLDPYKRVT
HCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
STDRELKAQGVGNILSCLIGGLPITQVIVRSSANVAFGAKSKLSAILHGLLLFICVISIP
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EILNEIPLASLASILIIIGYKLAKPALFKQMYKMGWEQFVPFMITIIGIIFSDLLFGITL
HHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
GFSLAIFIILRHHFLNSHDMIKTRGKNKTQYCLKLAEEVTFLNKGSIINELKNIPEGAEV
HHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEE
VIDGSRSKIIDHDIKEVIQNFILNSKTKNIQVKLIGI
EEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]