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The map label for this gene is 52842381

Identifier: 52842381

GI number: 52842381

Start: 2433024

End: 2433728

Strand: Reverse

Name: 52842381

Synonym: lpg2167

Alternate gene names: NA

Gene position: 2433728-2433024 (Counterclockwise)

Preceding gene: 52842382

Following gene: 52842378

Centisome position: 71.63

GC content: 41.56

Gene sequence:

>705_bases
ATGAAGAGCAATACCACTATGAGCAAAACTGAGAGACTCTTTCATCTGTTGCAAATTTTGCGGCGTTATCGTTATCCCCT
TAGTGGACAATTTCTTGCCAATGAGCTGGGTGTCAGTACCCGTACCATCTATCGGGACATTGCGGCTTTACAGGCTCAAG
GTGCTGATATTGAGGGTGAACCAGGATTGGGTTATGTGTTAAAACCAGGCTTTATGTTACCGCCTTTGATGTTTAATGAA
GAGGAAATTGAGGCTCTTGTTTTAGGCTCCAGATGGGTAGCTAAAAAAACGGATACTCACTTGCAACAGGCTGCTCATAA
TGCCTTGGCTAAAATCGCTTCTGTACTTCCTGCCGATTTGCGACAGCAATTGGAGCTATCCAGTTTATTAATAGGGCCTG
GTGAAGTGATTTCAGGAGAAGATGAATCTCTCGCATTAGTCAGAAAGGCAATACGAAAAGAACTGAAGTTGTTTATTCAA
TACCATGACTTAAAAGGAAATGTTTCAACGCGTACGATTTGGCCAATTGGACTTGGGTATTTTGATCAAGTAAGAGTTTT
GATTGCCTGGTGTGAATTAAAAAAGGATTTTCGTCATTTTAGAGCTGATAGAATTGTAGATGTTGAAAACTTGGGGGTCT
GTTATGCAAAGCGACGCTCGGTGTTACTTCATGATTGGCGAAAGCAAAATAATATCCCAGGCTGA

Upstream 100 bases:

>100_bases
AAAGACACTAATATTTCCTGGTGTTTTTTAGAAGCATCTGCAGATGGTTTGAATATTTATAAAAAGATTGGTTTTCGTGA
ACTGTTCAAAAATCTTTATT

Downstream 100 bases:

>100_bases
TGACAACACGATGTTATTGACGTGTTAACTTGAACAGGTAAAATTTAATGCCGGGAATCAAGTTTTACTTTCTTCCCGGA
TTAAGATTGCTTCCAATGCC

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; DeoR-Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; HTH Domain Family; Transcription Regulator Protein; HTH Type; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; Regulatory Protein; Bacterial Regulatory Protein DeoR Family; HTH Domain-Containing Protein; DeoR Family Transriptional Regulator; Transcription Repressor; Transcription Regulator Protein DeoR Family; Protein Containing HTH Domain; Transriptional Regulator DeoR Family; DeoR-Family Protein Transcriptional Regulator; NB-Dependent Receptor; HTH Domain-Containing; Regulatory Protein Deor; Helix-Turn-Helix Domain-Containing Protein; HTH Domain Protein; Transcriptional Regulator-Like; Transcriptional Repressor; Helix-Turn-Helix Family Protein

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKSNTTMSKTERLFHLLQILRRYRYPLSGQFLANELGVSTRTIYRDIAALQAQGADIEGEPGLGYVLKPGFMLPPLMFNE
EEIEALVLGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLELSSLLIGPGEVISGEDESLALVRKAIRKELKLFIQ
YHDLKGNVSTRTIWPIGLGYFDQVRVLIAWCELKKDFRHFRADRIVDVENLGVCYAKRRSVLLHDWRKQNNIPG

Sequences:

>Translated_234_residues
MKSNTTMSKTERLFHLLQILRRYRYPLSGQFLANELGVSTRTIYRDIAALQAQGADIEGEPGLGYVLKPGFMLPPLMFNE
EEIEALVLGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLELSSLLIGPGEVISGEDESLALVRKAIRKELKLFIQ
YHDLKGNVSTRTIWPIGLGYFDQVRVLIAWCELKKDFRHFRADRIVDVENLGVCYAKRRSVLLHDWRKQNNIPG
>Mature_234_residues
MKSNTTMSKTERLFHLLQILRRYRYPLSGQFLANELGVSTRTIYRDIAALQAQGADIEGEPGLGYVLKPGFMLPPLMFNE
EEIEALVLGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLELSSLLIGPGEVISGEDESLALVRKAIRKELKLFIQ
YHDLKGNVSTRTIWPIGLGYFDQVRVLIAWCELKKDFRHFRADRIVDVENLGVCYAKRRSVLLHDWRKQNNIPG

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26608; Mature: 26608

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNTTMSKTERLFHLLQILRRYRYPLSGQFLANELGVSTRTIYRDIAALQAQGADIEGE
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
PGLGYVLKPGFMLPPLMFNEEEIEALVLGSRWVAKKTDTHLQQAAHNALAKIASVLPADL
CCCCEEECCCCCCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RQQLELSSLLIGPGEVISGEDESLALVRKAIRKELKLFIQYHDLKGNVSTRTIWPIGLGY
HHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCH
FDQVRVLIAWCELKKDFRHFRADRIVDVENLGVCYAKRRSVLLHDWRKQNNIPG
HHHHHHHHHHHHHHHHHHHHHHHCEECHHHCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKSNTTMSKTERLFHLLQILRRYRYPLSGQFLANELGVSTRTIYRDIAALQAQGADIEGE
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
PGLGYVLKPGFMLPPLMFNEEEIEALVLGSRWVAKKTDTHLQQAAHNALAKIASVLPADL
CCCCEEECCCCCCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RQQLELSSLLIGPGEVISGEDESLALVRKAIRKELKLFIQYHDLKGNVSTRTIWPIGLGY
HHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCH
FDQVRVLIAWCELKKDFRHFRADRIVDVENLGVCYAKRRSVLLHDWRKQNNIPG
HHHHHHHHHHHHHHHHHHHHHHHCEECHHHCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA