Click here to switch to the map view.

The map label for this gene is 52842378

Identifier: 52842378

GI number: 52842378

Start: 2430292

End: 2430756

Strand: Reverse

Name: 52842378

Synonym: lpg2164

Alternate gene names: NA

Gene position: 2430756-2430292 (Counterclockwise)

Preceding gene: 52842381

Following gene: 52842377

Centisome position: 71.54

GC content: 41.94

Gene sequence:

>465_bases
ATGGTAAGCTGGGATCTATTTAATAAGGAGATTGGCATGTATTTTTCAAGATGTATTTCACATGGCGCTATTGCAGGAAT
TATAGCAGGAATTGTTTTTACCTTTTTTTTAGTTATGGGGGGCATGCTCGAAACATTGGGAAGTATGATTAATATGCCAA
CAAAAGGAGGAGGCCTTTTGGTGCATGCTGTAATGAGCATTGGCAGCGGGATCGTTTTTGCCCTGGTTCTGGATTGGTTA
ATGCATTCTTGGGTCTCAGCCATTCTTCTTGGGTTATTGTTTGGTTTTGCAATGTGGGTCGGCGGCCCAATGACCTTGTT
ACCCTATTTCGCTTCAGGGGTGCCTTTGTTTGCAAAATGGACTATGGAAGGATTTAAACAAAACATACCCCCTTTGGTTG
GGCATCTTGTGTATGGGTTGATATTGGGTGTTACTTATTATGCTTTCAAGCGCAGGAATAAGTGA

Upstream 100 bases:

>100_bases
AATAAGATGTTGATAATGTGGCTGGCAAAAAATTTTTTAAGACATTGCCATTAATTTTTCTACCTTAATTGTTGATTATT
AAGTAAACTGATGATTTTGA

Downstream 100 bases:

>100_bases
CTTCATTTTTCAGCGTAACAAATTGATTTTATTTAAAGATACAGTGACATCAAAAGGTGGTGATTGCTTTTTATGGCAAT
CGCCATCTCAATTTAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MVSWDLFNKEIGMYFSRCISHGAIAGIIAGIVFTFFLVMGGMLETLGSMINMPTKGGGLLVHAVMSIGSGIVFALVLDWL
MHSWVSAILLGLLFGFAMWVGGPMTLLPYFASGVPLFAKWTMEGFKQNIPPLVGHLVYGLILGVTYYAFKRRNK

Sequences:

>Translated_154_residues
MVSWDLFNKEIGMYFSRCISHGAIAGIIAGIVFTFFLVMGGMLETLGSMINMPTKGGGLLVHAVMSIGSGIVFALVLDWL
MHSWVSAILLGLLFGFAMWVGGPMTLLPYFASGVPLFAKWTMEGFKQNIPPLVGHLVYGLILGVTYYAFKRRNK
>Mature_154_residues
MVSWDLFNKEIGMYFSRCISHGAIAGIIAGIVFTFFLVMGGMLETLGSMINMPTKGGGLLVHAVMSIGSGIVFALVLDWL
MHSWVSAILLGLLFGFAMWVGGPMTLLPYFASGVPLFAKWTMEGFKQNIPPLVGHLVYGLILGVTYYAFKRRNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16858; Mature: 16858

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00457 NA_SOLUT_SYMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSWDLFNKEIGMYFSRCISHGAIAGIIAGIVFTFFLVMGGMLETLGSMINMPTKGGGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VHAVMSIGSGIVFALVLDWLMHSWVSAILLGLLFGFAMWVGGPMTLLPYFASGVPLFAKW
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHH
TMEGFKQNIPPLVGHLVYGLILGVTYYAFKRRNK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSWDLFNKEIGMYFSRCISHGAIAGIIAGIVFTFFLVMGGMLETLGSMINMPTKGGGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VHAVMSIGSGIVFALVLDWLMHSWVSAILLGLLFGFAMWVGGPMTLLPYFASGVPLFAKW
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHH
TMEGFKQNIPPLVGHLVYGLILGVTYYAFKRRNK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA