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The map label for this gene is ynjF [C]

Identifier: 52842314

GI number: 52842314

Start: 2348055

End: 2348642

Strand: Reverse

Name: ynjF [C]

Synonym: lpg2100

Alternate gene names: 52842314

Gene position: 2348642-2348055 (Counterclockwise)

Preceding gene: 52842315

Following gene: 52842309

Centisome position: 69.12

GC content: 40.14

Gene sequence:

>588_bases
ATGATAGAACAACACCTTAGGCCACTGTATCAACGCCTTTGTGTCAATCCAATTACTCCTGTGTTGATAGAGCGAGTGAC
CCCAAATCAAGTCACCTTCTTTTCTGGCGTATTGGGTCTTTTAGTGATACCCGCACTGTGGCTAAATCTACCCTATCTGG
CCATTAGTTTACTATTACTGTCTGGATATTGTGATACCCTCGATGGTACTATTGCTCGTCTAACTAACCATAGCTCTGAC
TGGGGTAGTGTATTGGATATTATGACTGATCGCGTGGTTGAGGTGGGTGTTGTGTTTGCCTTATGGGCTATTAATCCAAA
TGAGCGGGGTCTTGGGTCTTTGTTAATGATGGCGAGTATACTACTTTGTATCACGAGTTTTCTTGTTGTGGGTATTTTTA
AGACTAATGATTCAGAAAAAAGTTTTCATTACAGCCCAGGATTAATAGAAAGAGCTGAAGCCTTTGTTTTTTTTATAGCC
ATGATGCTTTGGCCAAACCACTTCCTAAGTTTAGCAATGATCTTTTCTTTGTTAGTGATAGGGACAGCGATGCACAGGCT
TTATGAATTTCATAAGCAATCTATTTAA

Upstream 100 bases:

>100_bases
GAAATTAGTAAGCGAGTTGCGGGAGAGTATTATAAGCCGTTTATATTTTCTTCTAAAATTCGAACTTTCGTTCGTTGGCT
AAATAAATTAGGATAAATCT

Downstream 100 bases:

>100_bases
AAAGAGTTAAATACTCTTCATAGCCTTCTTTGCTCATTTGATCTTTTGGGATAAATCGCAATGCCGCCGAATTCATGCAA
TATCGTTCACCGGTGGGTTT

Product: phosphatidoglycerophosphate synthase

Products: NA

Alternate protein names: Phosphatidylglycerophosphate Synthase; Phosphatidyl Transferase Inner Membrane Protein; Phosphatidyltransferase; Cytochrome Oxidase-Like Protein; Phosphatidoglycerophosphate Synthase

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MIEQHLRPLYQRLCVNPITPVLIERVTPNQVTFFSGVLGLLVIPALWLNLPYLAISLLLLSGYCDTLDGTIARLTNHSSD
WGSVLDIMTDRVVEVGVVFALWAINPNERGLGSLLMMASILLCITSFLVVGIFKTNDSEKSFHYSPGLIERAEAFVFFIA
MMLWPNHFLSLAMIFSLLVIGTAMHRLYEFHKQSI

Sequences:

>Translated_195_residues
MIEQHLRPLYQRLCVNPITPVLIERVTPNQVTFFSGVLGLLVIPALWLNLPYLAISLLLLSGYCDTLDGTIARLTNHSSD
WGSVLDIMTDRVVEVGVVFALWAINPNERGLGSLLMMASILLCITSFLVVGIFKTNDSEKSFHYSPGLIERAEAFVFFIA
MMLWPNHFLSLAMIFSLLVIGTAMHRLYEFHKQSI
>Mature_195_residues
MIEQHLRPLYQRLCVNPITPVLIERVTPNQVTFFSGVLGLLVIPALWLNLPYLAISLLLLSGYCDTLDGTIARLTNHSSD
WGSVLDIMTDRVVEVGVVFALWAINPNERGLGSLLMMASILLCITSFLVVGIFKTNDSEKSFHYSPGLIERAEAFVFFIA
MMLWPNHFLSLAMIFSLLVIGTAMHRLYEFHKQSI

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21928; Mature: 21928

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQHLRPLYQRLCVNPITPVLIERVTPNQVTFFSGVLGLLVIPALWLNLPYLAISLLLL
CCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SGYCDTLDGTIARLTNHSSDWGSVLDIMTDRVVEVGVVFALWAINPNERGLGSLLMMASI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LLCITSFLVVGIFKTNDSEKSFHYSPGLIERAEAFVFFIAMMLWPNHFLSLAMIFSLLVI
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTAMHRLYEFHKQSI
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEQHLRPLYQRLCVNPITPVLIERVTPNQVTFFSGVLGLLVIPALWLNLPYLAISLLLL
CCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SGYCDTLDGTIARLTNHSSDWGSVLDIMTDRVVEVGVVFALWAINPNERGLGSLLMMASI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LLCITSFLVVGIFKTNDSEKSFHYSPGLIERAEAFVFFIAMMLWPNHFLSLAMIFSLLVI
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTAMHRLYEFHKQSI
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA